The dynamics of lignin, a complex and heterogeneous major plant cell-wall macromolecule, is of both fundamental and practical importance. Lignin is typically heated to temperatures above its glass transition to facilitate its industrial processing. We performed molecular dynamics simulations to investigate the segmental (α) relaxation of lignin, the dynamical process that gives rise to the glass transition. It is found that lignin dynamics involves mainly internal motions below Tg, while segmental inter-molecular motions are activated above Tg. The segments whose mobility is enhanced above Tg consist of 3-5 lignin monomeric units. The temperature dependence of the lignin segmental relaxation time changes from Arrhenius below Tg to Vogel-Fulcher-Tamman above Tg. This change in temperature dependence is determined by the underlying energy landscape being restricted below Tg but exhibiting multiple minima above Tg. The Q-dependence of the relaxation time is found to obey a power-law up to Qmax, indicative of sub-diffusive motion of lignin above Tg. Temperature and hydration affect the segmental relaxation similarly. Increasing hydration or temperature leads to: (1) the α process starting earlier, i.e. the beta process becomes shortened, (2) Qmax decreasing, i.e. the lengthscale above which subdiffusion is observed increases, and (3) the number of monomers constituting a segment increasing, i.e. the motions that lead to the glass transition become more collective. The above findings provide molecular-level understanding of the technologically important segmental motions of lignin and demonstrate that, despite the heterogeneous and complex structure of lignin, its segmental dynamics can be described by concepts developed for chemically homogeneous polymers.
At a given temperature during a heating/cooling cycle, lignin is more dynamic upon cooling, which may guide efficient biomass processing.
The thermal mean square displacement (MSD) of hydrogen in proteins and its associated hydration water is measured by neutron scattering experiments and used an indicator of protein function. The observed MSD as currently determined depends on the energy resolution width of the neutron scattering instrument employed. We propose a method for obtaining the intrinsic MSD of H in the proteins, one that is independent of the instrument resolution width. The intrinsic MSD is defined as the infinite time value of r 2 that appears in the Debye-Waller factor. The method consists of fitting a model to the resolution broadened elastic incoherent structure factor or to the resolution dependent MSD. The model contains the intrinsic MSD, the instrument resolution width and a rate constant characterizing the motions of H in the protein. The method is illustrated by obtaining the intrinsic MSD r 2 of heparan sulphate (HS-0.4), Ribonuclease A and Staphysloccal Nuclase (SNase) from data in the literature.
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