The canine transmissible venereal tumor (CTVT) is a cancer lineage that arose several millennia ago and survives by “metastasizing” between hosts through cell transfer. The somatic mutations in this cancer record its phylogeography and evolutionary history. We constructed a time-resolved phylogeny from 546 CTVT exomes and describe the lineage’s worldwide expansion. Examining variation in mutational exposure, we identify a highly context-specific mutational process that operated early in the cancer’s evolution but subsequently vanished, correlate ultraviolet-light mutagenesis with tumor latitude, and describe tumors with heritable hyperactivity of an endogenous mutational process. CTVT displays little evidence of ongoing positive selection, and negative selection is detectable only in essential genes. We illustrate how long-lived clonal organisms capture changing mutagenic environments, and reveal that neutral genetic drift is the dominant feature of long-term cancer evolution.

The conservation of threatened species poses many challenges but through cooperation and pooling of resources, individuals and organizations can work together to achieve better results. Here we describe our experience, working through a governmental and private alliance, studying one of the most threatened mammals in the Southern Cone. The huemul deer Hippocamelus bisulcus, one of two members of the Hippocamelus genus of South America, is endemic to Argentina and Chile and currently inhabits only a small fraction of its former range. Little is known about the huemul because it generally lives in remote areas with a harsh climate and rugged terrain. Using drive counts and fixed width transects over 5 consecutive years (2004–2008) we estimated density and abundance, and examined population changes and social structure, in three coastal huemul populations in the area of the Témpanos and Bernardo fjords of Bernardo O'Higgins National Park, Chile. Our results suggest that synergistic conservation actions, such as cattle removal and poaching control, can lead to the recovery of threatened huemul. The baseline information obtained from our surveys and the lessons learned through this governmental and private alliance will be useful for future monitoring of the huemul in the Patagonian fjords of Chile.

We identified 3 novel and distinct avulaviruses from Gentoo penguins sampled in Antarctica. We isolated these viruses and sequenced their complete genomes; serologic assays demonstrated that the viruses do not have cross-reactivity between them. Our findings suggest that these 3 new viruses represent members of 3 novel avulavirus species.

Simple SummaryThe monk parakeet (Myiopsitta monachus) is an invasive species, unique in the parrot family for its ability to build large nest structures. This species became globally distributed, promoted in part due to the pet trade market, and now is considered a pest because of the economic losses they produce. During the reproductive seasons of 2017 and 2018, we registered interactions between invasive monk parakeets and resident bird species in Santiago, Chile. We observed positive and negative interactions, and herein, we describe parakeets’ nest occupancy by nine bird species, two invasive and seven native. For this reason, the monk parakeet should be considered an ecosystem engineer, a species that is creating available breeding space of potential use for other species. Our results contribute to an assessment of implications of this ecological invasion of local urban wildlife, and raise concern on other impacts, such as disease transmission, as a consequence of these interactions.AbstractThe monk parakeet (Myiopsitta monachus) is considered to be one of the most invasive bird species because its unique ability among parrots to build their own communal nests. Currently, they are considered an invasive species in 19 countries and a pest—even in their native distribution—because of economic losses derived from their impacts. During the reproductive seasons of 2017 and 2018, we registered interactions between invasive monk parakeets and resident bird species in Santiago, Chile. We observed agonistic and affiliative interactions, and further, we described monk parakeets’ nest occupancy by nine bird species, two invasive and seven native. For this reason, we consider that the monk parakeet is an allogenic ecosystem engineer with the potential to shape distribution and richness of sympatric species in urban environments. Our results contribute to an assessment of the implications of the monk parakeet’s ecological invasion to other synanthropic species, and raise concern of other potential impacts, such as pathogen transmission derived from these interactions.

Central Chile has been identified as a unique ecosystem with high conservation priority because of its high levels of endemism and intensive anthropic pressure. Over a period of almost four decades, the monk parakeet has been successful in establishing and dispersing in urban Santiago, although little is known about its potential impact. Furthermore, nothing is known about its epidemiological risks towards animals or even humans. For this reason, we conducted the first parasitic survey of monk parakeets in Chile through capture, necropsy and thorough external and internal inspection of 92 adult individuals. Among these, 45.7% presented lice that were identified as Paragoniocotes fulvofasciatum, 1.1% had mesostigmatid acari and 8.9% had free-ranging acari. Among 89 parakeets, 19.1% had structures identified as Cryptosporidium sp. This study provides the first description of Cryptosporidium sp. in monk parakeets. Along with the presence of a mesostigmatid acarus in one parakeet, this serves as a public health warning, given that both of these parasites have zoonotic potential.Keywords: Psittacidae, Paragoniocotes fulvofasciatum, mesostigmatid acarus, oribatid acari, Cryptosporidium. ResumoA porção central do Chile é reconhecidamente uma área com ecossistemas únicos de alta prioridade para conservação. Isso se deve aos altos níveis de endemismo na região e pressões antrópicas intensas. Durante quase quatro décadas, a caturrita tem obtido sucesso em seu estabelecimento e dispersão na área urbana de Santiago, apesar da falta de conhecimento com relação ao seu potencial impacto. Além disso, não há informações sobre riscos epidemiológicos para animais e tampouco para humanos. Motivado por essa questão, foi realizado o primeiro levantamento parasitário de caturritas no Chile a partir da captura, necropsia e inspeção interna e externa de 92 indivíduos adultos. Deste total, 45,7% apresentaram piolhos da espécie Paragoniocotes fulvofasciatum, 1,1% apresentaram ácaros da ordem Mesostigmata, e 8,9% apresentaram ácaros de vida livre. Dentre 89 caturritas, 19,1% apresentaram estruturas identificadas como Cryptosporidium sp. Este estudo apresenta a primeira descrição de Cryptosporidium sp. em caturritas. Ademais, a presença de ácaros da ordem Mesostigmata em uma das aves serve como um alerta para saúde pública, considerando que estes dois parasitas apresentam potencial zoonótico.Palavras-chave: Psittacidae, Paragoniocotes fulvofasciatum, ácaro mesostigmatídeo, ácaro orobatídeo, Cryptosporidium.

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Locally abundant ungulates often come into conflict with human activities. After a population collapse that reached its nadir in the s, the guanaco Lama guanicoe population in Tierra del Fuego, Chile, recovered and is now in conflict with sheep ranching and commercial logging. We studied the effects of livestock density and environmental factors on guanaco abundance and spatial ecology, using seasonal counts and radio-telemetry in a private protected area (Karukinka) and neighbouring ranches in a forest-grassland mosaic in Tierra del Fuego. Guanaco density was highest in low-elevation areas with more grassland cover and little snow accumulation in winter. In lowelevation areas, guanaco density decreased with increasing livestock density. Radio-tracked guanacos exhibited a partial migration pattern: two individuals migrated seasonally, selecting grasslands and avoiding forests mainly in summer, whereas six sedentary individuals used habitats according to their availability. Migratory guanacos spent the summer in Karukinka and winter on nearby ranches. High sheep densities and poor range condition on the ranches reduce key forage resources available to guanacos and may promote use of forests by guanacos, affecting forest regeneration and increasing conflict with logging. Current guanaco harvest by loggers may fail to reduce the impact of guanacos on loggedforest regeneration if guanaco spatial ecology and sheep management are not considered. Our results provide insight into the interactions among guanacos, forests and livestock ranching, and may be used to reduce conflicts and guide conservation in the Fuegian ecosystem.