Selective logging is the most prevalent land-use change in the tropics. Despite the resulting degradation of forest structure, selectively logged forests still harbor a substantial amount of biodiversity leading to suggestions that their protection is the next best alternative to conserving primary, old-growth forests. Restoring carbon stocks under Reducing Emissions from Deforestation and Forest Degradation (REDD+) schemes is a potential method for obtaining funding to protect logged forests, via enrichment planting and liberation cutting of vines. This study investigates the impacts of restoring logged forests in Borneo on avian phylogenetic diversity, the total evolutionary history shared across all species within a community, and on functional diversity, with important implications for the protection of evolutionarily unique species and the provision of many ecosystem services. Overall and understorey avifaunal communities were studied using point count and mist netting surveys, respectively. Restoration caused a significant loss in phylogenetic diversity and MPD (mean pairwise distance) leaving an overall bird community of less total evolutionary history and more closely related species compared to unlogged forests, while the understorey bird community had MNTD (mean nearest taxon distance) that returned toward the lower levels found in a primary forest, indicating more closely related species pairs. The overall bird community experienced a significant loss of functional strategies and species with more specialized traits in restored forests compared to that of unlogged forests, which led to functional clustering in the community. Restoration also led to a reduction in functional richness and thus niches occupied in the understorey bird community compared to unlogged forests. While there are additional benefits of restoration for forest regeneration, carbon sequestration, future timber harvests, and potentially reduced threat of forest conversion, this must be weighed against the apparent loss of phylogenetic and functional diversity from unlogged forest levels, making the biodiversity-friendliness of carbon sequestration schemes questionable under future REDD+ agreements. To reduce perverse biodiversity outcomes, it is important to focus restoration only on the most degraded areas or at reduced intensity where breaks between regimes are incorporated.

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Selective logging is the most extensive land use threatening tropical forests worldwide, making our understanding of its impacts on biodiversity vital for the conservation of these hyperdiverse ecosystems. We investigated the effects of selective logging on the phylogenetic and functional diversity (FD) of Amazonian forest avifauna. We sampled the overall and the understorey bird community using point counts and mist-netting, respectively, in logged and unlogged forests. The overall bird community showed significantly lower phylogenetic diversity (PD) and FD in logged than unlogged forests, but significantly higher standard effect size (ses) of PD, ses mean pairwise distance (MPD), mean nearest taxon distance (MNTD), ses functional MPD (sesfMPD) and functional MNTD (fMNTD) in logged sites. Evolutionary distinctiveness, sesMPD, sesFD, fMNTD and sesfMNTD of understorey birds were significantly higher in logged forests. Higher logging intensity affected some metrics negatively and others positively, although the relatively small changes in phylogenetic and FD suggest limited overall effects from logging at lower intensity. In combination, selective logging brings deleterious effects for some components of phylogenetic and FD of the overall Amazonian bird community. Nonetheless, selectively logged forests retain important avian diversity, underscoring their high conservation value. Relatively, low impacts of selective logging may be due to the reduced-impact logging (RIL) techniques used, high connectivity with well-preserved unlogged forests or focus on short-term logging impacts. Because even low-intensity RIL causes some losses in evolutionary history and functional traits, an optimal approach for conserving phylogenetic and FD requires incorporating some land-sparing logging to protect more old-growth patches within the logged matrix. Animal Conservation.

Tropical forests are experiencing enormous threats from deforestation and habitat degradation. Much knowledge of the impacts of these land-use changes on tropical species comes from studies examining patterns of richness and abundance. Demographic vital rates (survival, reproduction, and movement) can also be affected by land-use change in a way that increases species vulnerability to extirpation, but in many cases these impacts may not be manifested in short-term changes in abundance or species richness. We conducted a literature review to assess current knowledge and research effort concerning how land-use change affects species vital rates in tropical forest vertebrates. We found a general paucity of empirical research on demography across taxa and regions, with some biases toward mammals and birds and land-use transitions, including fragmentation and agriculture. There is also considerable between-species variation in demographic responses to land-use change, which could reflect trait-based differences in species sensitivity, complex context dependencies (e.g., between-region variation), or inconsistency in methods used in studies. Efforts to improve understanding of anthropogenic impacts on species demography are underway, but there is a need for increased research effort to fill knowledge gaps in understudied tropical regions and taxa. The lack of information on demographic impacts of anthropogenic disturbance makes it difficult to draw definite conclusions about the magnitude of threats to tropical ecosystems under anthropogenic pressures. Thus, determining conservation priorities and improving conservation effectiveness remains a challenge.

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Selective logging dominates forested landscapes across the tropics. Despite the structural damage incurred, selectively logged forests typically retain more biodiversity than other forest disturbances. Most logging impact studies consider conventional metrics, like species richness, but these can conceal subtle biodiversity impacts. The mass–abundance relationship is an integral feature of ecological communities, describing the negative relationship between body mass and population abundance, where, in a system without anthropogenic influence, larger species are less abundant due to higher energy requirements. Changes in this relationship can indicate community structure and function changes. We investigated the impacts of selective logging on the mass–abundance scaling of avian communities by conducting a meta‐analysis to examine its pantropical trend. We divide our analysis between studies using mist netting, sampling the understory avian community, and point counts, sampling the entire community. Across 19 mist‐netting studies, we found no consistent effects of selective logging on mass–abundance scaling relative to primary forests, except for the omnivore guild where there were fewer larger‐bodied species after logging. In eleven point‐count studies, we found a more negative relationship in the whole community after logging, likely driven by the frugivore guild, showing a similar pattern. Limited effects of logging on mass–abundance scaling may suggest high species turnover in logged communities, with like‐for‐like replacement of lost species with similar‐sized species. The increased negative mass–abundance relationship found in some logged communities could result from resource depletion, density compensation, or increased hunting; potentially indicating downstream impacts on ecosystem functions. Synthesis and applications. Our results suggest that size distributions of avian communities in logged forests are relatively robust to disturbance, potentially maintaining ecosystem processes in these forests, thus underscoring the high conservation value of logged tropical forests, indicating an urgent need to focus on their protection from further degradation and deforestation.

Selective logging is a major driver of environmental changes in the tropics. Recently, there has been increasing interest in understanding which traits make bird species resilient or vulnerable to such changes. Physiological stress mediated by the steroid hormone corticosterone (CORT) might underlie changes in local abundance of species because it regulates a range of body functions and behaviours to maintain homeostasis in changing environments. We conducted a 3‐year study to assess (a) the variation in CORT levels in feathers (where CORT is deposited during the moult) of 10 understorey bird species across both unlogged old‐growth forest and selectively logged forest in Borneo, (b) how this variation is associated with within‐year variation in population abundance between forest types and (c) whether the difference in feather CORT (fCORT) between co‐specific populations living in unlogged and logged forests in 1 year is related with their difference in population abundance the following year. We used effect size estimates to measure standardized magnitude and direction of fCORT changes between unlogged and selectively logged forest. We found small to large effect sizes, indicating large among‐species variation in physiological acclimatization to changes in forest conditions. In 2016 and 2018, species with relatively higher fCORT in unlogged forest were relatively more abundant in logged forest in the same year; in 2017, species with relatively higher fCORT in logged forest were relatively more abundant in logged forest. Importantly, we found that for a given species, the difference in fCORT at year (x) between unlogged and logged forests was negatively related with a difference in its local abundance between the two forest types in the following year (x + 1). Our results point to glucocorticoid hormones as potential mediators of carry‐over effects on population abundance due to direct and indirect effects of silvicultural practices in tropical forests of Borneo, suggesting fCORT as a potential marker of population changes. A free Plain Language Summary can be found within the Supporting Information of this article.

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