Tissue samples from 699 birds from three regions of Asia (Myanmar, India, and South Korea) were screened for evidence of infection by avian parasites in the genera Plasmodium and Haemoproteus. Samples were collected from November 1994 to October 2004. We identified 241 infected birds (34.0%). Base-on-sequence data for the cytochrome b gene from 221 positive samples, 34 distinct lineages of Plasmodium, and 41 of Haemoproteus were detected. Parasite diversity was highest in Myanmar followed by India and South Korea. Parasite prevalence differed among regions but not among host families. There were four lineages of Plasmodium and one of Haemoproteus shared between Myanmar and India and only one lineage of Plasmodium shared between Myanmar and South Korea. No lineages were shared between India and South Korea, although an equal number of distinct lineages were recovered from each region. Migratory birds in South Korea and India originate from two different migratory flyways; therefore cross-transmission of parasite lineages may be less likely. India and Myanmar shared more host species and habitat types compared to South Korea. Comparison between low-elevation habitat in India and Myanmar showed a difference in prevalence of haematozoans.
We used screening techniques based on polymerase chain reaction (PCR) to explore the avian hematozoan parasites (Plasmodium spp. and Haemoproteus spp.) of two previously uninvestigated regions of continental South America. Comparisons of tropicalzone Guyana and temperate-zone Uruguay revealed that overall prevalence of Plasmodium and Haemoproteus species detected in a diverse sampling of potential hosts was significantly higher in Guyana. The difference in prevalence between the two geographic zones appears to be attributable to ecological differences rather than taxonomic sampling artifacts. Diversity of hematozoan haplotypes was also higher in Guyana. We found no relationship between hematozoan haplotype and host family sampled within or between regions. We found very few Plasmodium and no Haemoproteus haplotypes shared between the two regions, and evidence of geographic structuring of hematozoan haplotypes between the two regions. We suggest that a lack of hematozoan haplotype transmission between the two regions may be attributable to the migratory patterns of each region's avian hosts.
The Division of Birds, National Museum of Natural History, Smithsonian Institution in Washington, DC, has obtained and released DNA barcodes for 2808 frozen tissue samples. Of the 1,403 species represented by these samples, 1,147 species have not been barcoded previously. This data release increases the number of bird species with standard barcodes by 91%. These records meet the data standard of the Consortium for the Barcode of Life and they have the reserved keyword BARCODE in GenBank. The data are now available on GenBank and the Barcode of Life Data Systems.
Diffusible iodine-based contrast-enhanced computed tomography (diceCT) techniques allow visualization of soft tissues of fluid-preserved specimens in three dimensions without dissection or histology. Two popular diceCT stains, iodine-potassium iodide (I 2 KI) dissolved in water and elemental iodine (I 2) dissolved in 100% ethanol (EtOH), yield striking results. Despite the widespread use of these stains in clinical and biological fields, the molecular mechanisms that result in color change and radiopacity attributed to iodine staining are poorly understood. Requests to apply these stains to anatomical specimens preserved in natural history museums are increasing, yet curators have little information about the potential for degradation of treated specimens. To assess the molecular effects of iodine staining on typical museum specimens, we compared the two popular stains and two relatively unexplored stains (I 2 KI in 70% EtOH, I 2 in 70% EtOH). House sparrows (Passer domesticus) were collected and preserved under uniform conditions following standard museum protocols, and each was then subjected to one of the stains. Results show that the three ethanolbased stains worked equally well (producing fully stained, lifelike , publication quality scans) but in different timeframes (five, six, or eight weeks). The specimen in I 2 KI in water became degraded in physical condition, including developing flexible, demineralized bones. The ethanol-based methods also resulted in some demineralization but less than the water-based stain. The pH of the water-based stain was notably acidic compared to the water used as solvent in the stain. Our molecular analyses indicate that whereas none of the stains resulted in unacceptable levels of protein degradation, the bones of a specimen stained with I 2 KI in water demineralized throughout the staining process. We conclude that staining with I 2 KI or elemental I 2 in 70% EtOH can yield high-quality soft-tissue visualization in a timeframe that is similar to that of better-known iodine-based stains, with lower risk of negative impacts on specimen condition.
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