We investigate the role of excess excitation energy on the nature of photoexcitations in donor-acceptor π-conjugated materials. We compare the polymer poly(2,6-(4,4-bis(2-ethylhexyl)-4H-cyclopenta[1,2-b;3,4-b']dithiophene)-4,7-benzo[2,1,3]thiadiazole) (PCPDTBT) and a short oligomer with identical constituents at different excitation wavelengths, from the near-infrared up to the ultraviolet spectral region. Ultrafast spectroscopic measurements clearly show an increased polaron pair yield for higher excess energies directly after photoexcitation when compared to the exciton population. This effect, already observable in the polymer, is even more pronounced for the shorter oligomer. Supported by quantum chemical simulations, we show that excitation in high-energy states generates electron and hole wave functions with reduced overlap, which likely act as precursors for the polaron pairs. Interestingly, in the oligomer we observe a lifetime of polaron pairs which is one order of magnitude longer. We suggest that this behavior results from the intermolecular nature of polaron pairs in oligomers. The study excludes the presence of carrier multiplication in these materials and highlights new aspects in the photophysics of donor-acceptor small molecules when compared to polymers. The former are identified as promising materials for efficient organic photovoltaics.
The origin of the spectral shift from a red-to a greenabsorbing form in a cyanobacteriochrome, Slr1393g3, is identified by application of combined quantum mechanics/molecular mechanics simulations. This protein, related to classical phytochromes, carries the open-chain tetrapyrrole chromophore phycocyanobilin. Our calculations reveal that the effective conjugation length in the chromophore becomes shorter upon conversion from the red to the green form. This is related to the planarity of the entire chromophore. A large distortion is found for the terminal pyrrole rings A and D, however, the D ring contributes stronger to the photoproduct tuning, despite a larger change in the twist of the A ring. Our findings implicate that the D ring twist can be exploited to regulate absorption of the photoproduct. Hence, mutations that affect the D ring twist can lead to rational tuning of the photoproduct absorption that allows tailoring of cyanobacteriochromes for biotechnological applications such as optogenetics and bioimaging.
The three-dimensional (3D) crystal structures of the GAF3 domain of cyanobacteriochrome Slr1393 (Synechocystis PCC6803) carrying a phycocyanobilin chromophore could be solved in both 15-Z dark-adapted state, Pr, λmax = 649 nm, and 15-E photoproduct, Pg, λmax = 536 nm (resolution, 1.6 and 1.86 Å, respectively). The structural data allowed identifying the large spectral shift of the Pr-to-Pg conversion as resulting from an out-of-plane rotation of the chromophore’s peripheral rings and an outward movement of a short helix formed from a formerly unstructured loop. In addition, a third structure (2.1-Å resolution) starting from the photoproduct crystals allowed identification of elements that regulate the absorption maxima. In this peculiar form, generated during X-ray exposition, protein and chromophore conformation still resemble the photoproduct state, except for the D-ring already in 15-Z configuration and tilted out of plane akin the dark state. Due to its formation from the photoproduct, it might be considered an early conformational change initiating the parental state-recovering photocycle. The high quality and the distinct features of the three forms allowed for applying quantum-chemical calculations in the framework of multiscale modeling to rationalize the absorption maxima changes. A systematic analysis of the PCB chromophore in the presence and absence of the protein environment showed that the direct electrostatic effect is negligible on the spectral tuning. However, the protein forces the outer pyrrole rings of the chromophore to deviate from coplanarity, which is identified as the dominating factor for the color regulation.
Phytochromes are a diverse family of bilin-binding photoreceptors that regulate a wide range of physiological processes. Their photochemical properties make them attractive for applications in optogenetics and superresolution microscopy. Phytochromes undergo reversible photoconversion triggered by theZ⇄Ephotoisomerization about the double bond in the bilin chromophore. However, it is not fully understood at the molecular level how the protein framework facilitates the complex photoisomerization dynamics. We have studied a single-domain bilin-binding photoreceptor All2699g1 (Nostocsp. PCC 7120) that exhibits photoconversion between the red light-absorbing (Pr) and far red-absorbing (Pfr) states just like canonical phytochromes. We present the crystal structure and examine the photoisomerization mechanism of the Prform as well as the formation of the primary photoproduct Lumi-R using time-resolved spectroscopy and hybrid quantum mechanics/molecular mechanics simulations. We show that the unusually long excited state lifetime (broad lifetime distribution centered at ∼300 picoseconds) is due to the interactions between the isomerizing pyrrole ring D and an adjacent conserved Tyr142. The decay kinetics shows a strongly distributed character which is imposed by the nonexponential protein dynamics. Our findings offer a mechanistic insight into how the quantum efficiency of the bilin photoisomerization is tuned by the protein environment, thereby providing a structural framework for engineering bilin-based optical agents for imaging and optogenetics applications.
Understanding electronic energy transfer (EET) is an important ingredient in the development of artificial photosynthetic systems and photovoltaic technologies. Although EET is at the heart of these applications and crucially influences their light-harvesting efficiency, the nature of EET over short distances for covalently bound donor and acceptor units is often not well understood. Here we investigate EET in an orthogonal molecular dyad (BODT4), in which simple models fail to explain the very origin of EET. On the basis of nonadiabatic ab initio molecular dynamics calculations and ultrafast fluorescence experiments, we gain detailed microscopic insights into the ultrafast electrovibrational dynamics following photoexcitation. Our analysis offers molecular-level insights into these processes and reveals that it takes place on time scales ≲100 fs and occurs through an intermediate charge-transfer state.
Bilaterally extended perylenes were synthesized, characterized, and used to create organic light-emitting devices. A detailed investigation of the electronic and optical properties, and a comparison of perylene derivatives and compounds with unilaterally and bilaterally extended aromatic cores, reveal unexpected changes of the absorption spectrum, which are in agreement with simulations based on DFT.
Perylene derivatives with a unilaterally and bilaterally extended core show luminescence in the visible wavelength range (500−600 nm) that can be excited by absorption in the ultraviolet range (360−370 nm). This unusual behavior is investigated by means of excitation spectroscopy, cyclic voltammetry, and calculations based on (time-dependent) density functional theory. The results indicate that the extended compounds show promising features for optoelectronic applications and even might be used as fluorescent dyes in lasing. This is supported by nonadiabatic ab initio molecular dynamics. With respect to applications in organic optoelectronic nanostructures, nanofilms were prepared via spin-coating and thermal vapor deposition and demonstrated the formation of excimers. The relationship between the excimer-induced bathochromic shift and the interplanar distance of the molecules opens up the possibility to vary the perceived color of a nanofilm via tempering.
We study electronic and optical properties of the low-bandgap co-polymer PCPDT-BT (poly-cyclopentadithiophene-co-benzothiadiazole) and compare it with the corresponding homo-polymer PCPDT (poly-cyclopentadithiophene). We investigate the linear absorptivity in these systems for neutral molecules and for their singly charged ions based on quantum-chemical calculations and experiments. One of our main findings is that the ions of the homo-polymer show a polaron absorption that is symmetric between anion and cation, whereas for polaron excitations in the co-polymer this symmetry is strongly lifted. We demonstrate that this asymmetry can be attributed to the absence of symmetry between the high-lying occupied and low-lying unoccupied molecular orbitals in the co-polymer with type-II orbital alignment between the moieties constituting the chain. This notion is of importance for the qualitative and quantitative interpretation of spectroscopic polaron data and is not specific to the system studied here but similarly applies to other co-polymers.
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