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Summary Peatlands are an important component of the global carbon cycle because they comprise huge amounts of terrestrial carbon (C). Different conditions during peat formation and secondary peat decomposition affect the quantity and composition of soil organic matter (SOM) in peats. There are few comparative studies on the chemical composition of SOM in temperate peatland soil. This study investigates compositional changes of SOM functional groups in peats and corresponding peat‐forming plants by Fourier transform infrared (FTIR) spectroscopy. Three plant samples and 29 peat samples were taken from seven temperate peatland sites with different genesis and land‐use intensity. Site‐specific differences, such as genesis of the peat, were found to be reflected in the FTIR spectra. In general, there was more variation in FTIR spectra in samples from fens than in those from bogs and peat‐forming plants. The samples from fens have a smaller C–H absorption band than those from bogs and plants, which reflects greater biochemical activity in the minerotrophic than ombrotrophic environments. In addition to peat genesis, drainage and secondary peat decomposition also affect SOM composition substantially. The larger amounts of aliphatic compounds in undrained peats could be explained by selective preservation caused by anaerobic conditions. With increasing drainage of the sites, there was a decrease in the C–H absorption that was accompanied by a relative increase in C=O absorption. These changes in absorption intensities reflect the enhanced aerobic decomposition and mineralization that accompanies drainage and land‐use intensity. However, the ‘degree of peat decomposition’, a diagnostic tool used in the field, is not reflected by OM composition determined by FTIR spectroscopy. Our results contribute to further understanding of changes in SOM composition during peat formation and processes of secondary decomposition caused by drainage.

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The application of electrical resistivity tomography to peatlands supports conventional coring by providing data on the current condition of peatlands, including data on stratigraphy, peat properties and thickness of organic deposits. Data on the current condition of drained peatlands are particularly required to improve estimates of carbon storage as well as losses and emissions from agriculturally used peatlands. However, most of the studies focusing on electrical resistivity tomography surveys have been conducted on natural peatlands with higher groundwater levels. Peatlands drained for agriculture have not often been studied using geophysical techniques. Drained sites are characterized by low groundwater levels and high groundwater fluctuations during the year, which lead to varying levels of water saturation. To validate better electrical resistivity tomography surveys of drained peatlands, the aim of this laboratory study is to investigate the influence of varying water saturation levels on electrical conductivity (reciprocal of resistivity) for a variety of peat and gyttja types, as well as for different degrees of peat decomposition. Results show that different levels of water saturation strongly influence bulk electrical conductivity. Distinct differences in this relationship exist between peat and gyttja substrates and between different degrees of peat decomposition. Peat shows an exponential relationship for all degrees of decomposition, whereas gyttja, in particular organic‐rich gyttja, is characterized by a rather unimodal relationship. The slopes for the relationship between electrical conductivity and water content are steeper at high degrees of decomposition than for peat of low degrees of decomposition. These results have direct implications for field electrical resistivity tomography surveys. In drained peatlands that are strongly susceptible to drying, electrical resistivity tomography surveys have a high potential to monitor the actual field water content. In addition, at comparable water saturations, high or low degrees of decomposition can be inferred from electrical conductivity.

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