Animal tracking data are being collected more frequently, in greater detail, and on smaller taxa than ever before. These data hold the promise to increase the relevance of animal movement for understanding ecological processes, but this potential will only be fully realized if their accompanying location error is properly addressed. Historically, coarsely-sampled movement data have proved invaluable for understanding large scale processes (e.g., home range, habitat selection, etc.), but modern fine-scale data promise to unlock far more ecological information. While location error can often be ignored in coarsely sampled data, fine-scale data require much more care, and tools to do this have been lacking. Current approaches to dealing with location error largely fall into two categories—either discarding the least accurate location estimates prior to analysis or simultaneously fitting movement and error parameters in a hidden-state model. Unfortunately, both of these approaches have serious flaws. Here, we provide a general framework to account for location error in the analysis of animal tracking data, so that their potential can be unlocked. We apply our error-model-selection framework to 190 GPS, cellular, and acoustic devices representing 27 models from 14 manufacturers. Collectively, these devices are used to track a wide range of animal species comprising birds, fish, reptiles, and mammals of different sizes and with different behaviors, in urban, suburban, and wild settings. Then, using empirical data on tracked individuals from multiple species, we provide an overview of modern, error-informed movement analyses, including continuous-time path reconstruction, home-range distribution, home-range overlap, speed and distance estimation. Adding to these techniques, we introduce new error-informed estimators for outlier detection and autocorrelation visualization. We furthermore demonstrate how error-informed analyses on calibrated tracking data can be necessary to ensure that estimates are accurate and insensitive to location error, and allow researchers to use all of their data. Because error-induced biases depend on so many factors—sampling schedule, movement characteristics, tracking device, habitat, etc.—differential bias can easily confound biological inference and lead researchers to draw false conclusions.
Nonconsumptive effects of predators potentially have negative fitness consequences on prey species through changes in prey behavior. Coyotes (Canis latrans) recently expanded into the eastern United States, and raccoons (Procyon lotor) are a common mesocarnivore that potentially serve as competitors and food for coyotes. We used camera traps at baited sites to quantify vigilance behavior of feeding raccoons and used binomial logistic regression to analyze the effects of social and environmental factors. Additionally, we created raccoon and coyote activity patterns from the camera trap data by fitting density functions based on circular statistics and calculating the coefficient of overlap (Δ). Overall, raccoons were vigilant 46% of the time while foraging at baited sites. Raccoons were more vigilant during full moon and diurnal hours but less vigilant as group size increased and when other species were present. Raccoons and coyotes demonstrated nocturnal activity patterns, with coyotes more likely to be active during daylight hours. Overall, raccoons did not appear to exhibit high levels of vigilance. Activity pattern results provided further evidence that raccoons do not appear to fear coyotes, as both species were active at the same time and showed a high degree of overlap (Δ = 0.75) with little evidence of temporal segregation in activity. Thus, our study indicates that nonconsumptive effects of coyotes on raccoons are unlikely, which calls into question the ability of coyotes to initiate strong trophic cascades through some mesocarnivores.
Animals moving through landscapes need to strike a balance between finding sufficient resources to grow and reproduce while minimizing encounters with predators. Because encounter rates are determined by the average distance over which directed motion persists, this trade-off should be apparent in individuals' movement. Using GPS data from 1,396 individuals across 62 species of terrestrial mammals, we show how predators maintained directed motion ~7 times longer than for similarly-sized prey, revealing how prey species must trade off search efficiency against predator encounter rates. Individual search strategies were also modulated by resource abundance, with prey species forced to risk higher predator encounter rates when resources were scarce. These findings highlight the interplay between encounter rates and resource availability in shaping broad patterns mammalian movement strategies.
Integration of multiple, heterogeneous sensors is a challenging problem across a range of applications. Prominent among these are multi-target tracking, where one must combine observations from different sensor types in a meaningful and efficient way to track multiple targets. Because different sensors have differing error models, we seek a theoretically-justified quantification of the agreement amongst ensembles of sensors, both overall for a sensor collection, and also at a finegrained level specifying pairwise and multi-way interactions amongst sensors. We demonstrate that the theory of mathematical sheaves provides a unified answer to this need, supporting both quantitative and qualitative data. Furthermore, the theory provides algorithms to globalize data across the network of deployed sensors, and to diagnose issues when the data do not globalize cleanly. We demonstrate and illustrate the utility of sheaf-based tracking models based on experimental data of a wild population of black bears in Asheville, North Carolina. A measurement model involving four sensors deployed amongst the bears and the team of scientists charged with tracking their location is deployed. This provides a sheaf-based integration model which is small enough to fully interpret, but of sufficient complexity to demonstrate the sheaf's ability to recover a holistic picture of the locations and behaviors of both individual bears and the bear-human tracking system. A statistical approach was developed in parallel for comparison, a dynamic linear model which was estimated using a Kalman filter. This approach also recovered bear and human locations and sensor accuracies. When the observations are normalized into a common coordinate system, the structure of the dynamic linear observation model recapitulates the structure of the sheaf model, demonstrating the canonicity of the sheaf-based approach. But when the observations are not so normalized, the sheaf model still remains valid.
Integration of multiple, heterogeneous sensors is a challenging problem across a range of applications. Prominent among these are multi-target tracking, where one must combine observations from different sensor types in a meaningful and efficient way to track multiple targets. Because different sensors have differing error models, we seek a theoretically justified quantification of the agreement among ensembles of sensors, both overall for a sensor collection, and also at a fine-grained level specifying pairwise and multi-way interactions among sensors. We demonstrate that the theory of mathematical sheaves provides a unified answer to this need, supporting both quantitative and qualitative data. Furthermore, the theory provides algorithms to globalize data across the network of deployed sensors, and to diagnose issues when the data do not globalize cleanly. We demonstrate and illustrate the utility of sheaf-based tracking models based on experimental data of a wild population of black bears in Asheville, North Carolina. A measurement model involving four sensors deployed among the bears and the team of scientists charged with tracking their location is deployed. This provides a sheaf-based integration model which is small enough to fully interpret, but of sufficient complexity to demonstrate the sheaf’s ability to recover a holistic picture of the locations and behaviors of both individual bears and the bear-human tracking system. A statistical approach was developed in parallel for comparison, a dynamic linear model which was estimated using a Kalman filter. This approach also recovered bear and human locations and sensor accuracies. When the observations are normalized into a common coordinate system, the structure of the dynamic linear observation model recapitulates the structure of the sheaf model, demonstrating the canonicity of the sheaf-based approach. However, when the observations are not so normalized, the sheaf model still remains valid.
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