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Systemic lupus erythematosus (SLE) is a systemic autoimmune disease that affects thousands of people worldwide. Recently, alterations in metabolism and gut microbiome have emerged as key regulators of SLE pathogenesis. However, it is not clear about the coordination of gut commensal bacteria and SLE metabolism. Here, by integrating 16S sequencing and metabolomics data, we characterized the gut microbiome and fecal and serum metabolome alterations in patients with SLE. Microbial diversity sequencing revealed gut microflora dysbiosis in SLE patients with significantly increased beta diversity. The metabolomics profiling identified 43 and 55 significantly changed metabolites in serum and feces samples in SLE patients. Notably, lipids accounted for about 65% altered metabolites in serum, highlighted the disruption of lipid metabolism. Integrated correlation analysis provided a link between the gut microbiome and lipid metabolism in patients with SLE, particularly according to regulate the conversion of primary bile acids to secondary bile acids. Overall, our results illustrate the perturbation of the gut microbiome and metabolome in SLE patients which may facilitate the development of new SLE interventions.

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This study investigated the impact of composting substrate types on the bacterial community structure and dynamics during composting processes. To this end, pig manure (PM), chicken manure (CM), a mixture of PM and CM (PM + CM), and a mixture of PM, CM and anaerobic digestion residue (ADR) (PM + CM + ADR) were selected for thermophilic composting. The bacterial community structure and dynamics during the composting process were detected and analysed by polymerase chain reaction–denaturing gradient gel electrophoresis (DGGE) coupled with a statistic analysis. The physical-chemical analyses indicated that compared to single-material composting (PM, CM), co-composting (PM + CM, PM + CM + ADR) could promote the degradation of organic matter and strengthen the ability of conserving nitrogen. A DGGE profile and statistical analysis demonstrated that co-composting, especially PM + CM + ADR, could improve the bacterial community structure and functional diversity, even in the thermophilic stage. Therefore, co-composting could weaken the screening effect of high temperature on bacterial communities. Dominant sequencing analyses indicated a dramatic shift in the dominant bacterial communities from single-material composting to co-composting. Notably, compared with PM, PM + CM increased the quantity of xylan-degrading bacteria and reduced the quantity of human pathogens.

In this study, the sediment profiles of total organic carbon, total nitrogen, C/N ratios, total phosphorus, N/P ratios, C/P ratios, particle sizes, and stable carbon and nitrogen isotopes (δ(13)C and δ(15)N) were used to investigate natural and anthropogenic impacts on Lake Chaohu over the past 100 years. Before 1960, Lake Chaohu experienced low productivity and a relatively steady and low nutrient input. The increasing concentration and fluxes of total organic carbon, total nitrogen, total phosphorus, together with changes in the δ(13)C and δ(15)N of organic material in the sediment cores, suggested that the anthropogenic effects on trophic status first started because of an increase in nutrient input caused by a population increase in the drainage area. With the construction of the Chaohu Dam, an increase in the utilization of fertilizer and the population growth which occurred since 1960, stable depositional conditions and increasing nutrient input resulted in a dominantly algae-derived organic matter source and high productivity. Nutrient input increased most significantly around 1980 following the rapidly growing population, with concomitant urbanization, industrial and agricultural development. This study also revealed that the concentration and distribution of nutrients varied between different areas of sediment within Lake Chaohu because of the influence of different drainage basins and pollution sources.