1. Freshwater fish are in decline worldwide as a result of introduced non-native species, impoundment, water quality changes, over-abstraction, and climate change.2. The Clanwilliam sandfish Labeo seeberi is an endangered migratory cyprinid endemic to a single river system in South Africa's Cape Fold Ecoregion. It has declined across its range and persists as fragmented populations in the Doring River system.3. One of the last recruiting populations occurs in the Oorlogskloof River, where three non-native fish species are present: smallmouth bass Micropterus dolomieu, bluegill sunfish Lepomis macrochirus (both alien and invasive), and banded tilapia Tilapia sparrmanii (extralimital). Impacts of these non-natives, together with climate change, may pose a serious threat to this important sandfish population and to other cohabiting native fish species.4. A 6 year data set, collected over 9 years and spanning 25 km of the Oorlogskloof River, was analysed to characterize spatio-temporal variation in sandfish abundance and size structure and to evaluate the relative impacts of biotic and abiotic factors on population trends. 5. Sandfish experienced a 92.6% decline in relative abundance from 2013 to 2018, driven by a 99.6% decline in young-of-the-year individuals. A combination of extreme rainfall events and drought appear to have played a key role in the decline and subsequently prevented recovery.6. Small sandfish (≤200 mm) were almost entirely absent from the centrarchidinvaded section of the Oorlogskloof but were relatively abundant where these centrarchids were absent, suggesting a strong adverse impact of these non-native species. Banded tilapia co-occurred with sandfish without any apparent adverse impacts on the relative abundance or size structure of sandfish. 7. Improved water resource management and preventing the further spread of nonnatives must be conservation priorities. Localized eradication of non-native
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