Anchialine caves are characterized by high levels of endemism and extreme conditions. However, few ecological studies have been conducted in these ecosystems. This study integrates biotic and abiotic parameters of two sets of cave systems with contrasting high and low species richness. Seven ecological patterns are used to explain the expected species richness and density in an anchialine cave. In addition, the population size for conspicuous macrofauna was estimated. The high impact that single-events have on anchialine fauna are also reported. These findings reinforce the conclusions of previous studies of the high extinction risk of anchialine cave fauna, and substantiate the necessity of ad hoc conservation strategies for anchialine caves.

Early naturalists suggested that predation intensity increases toward the tropics, affecting fundamental ecological and evolutionary processes by latitude, but empirical support is still limited. Several studies have measured consumption rates across latitude at large scales, with variable results. Moreover, how predation affects prey community composition at such geographic scales remains unknown. Using standardized experiments that spanned 115° of latitude, at 36 nearshore sites along both coasts of the Americas, we found that marine predators have both higher consumption rates and consistently stronger impacts on biomass and species composition of marine invertebrate communities in warmer tropical waters, likely owing to fish predators. Our results provide robust support for a temperature-dependent gradient in interaction strength and have potential implications for how marine ecosystems will respond to ocean warming.

The Gulf of California endemic reef fish, Acanthemblemaria crockeri (Blennioidei, Chaenopsidae), reportedly has two colour morphs, one with melanic lateral spots ('Gulf' morph) and one with orange spots ('Cape' morph). In this study, we recorded colour morph in both males and females and collected mitochondrial DNA sequence data for cytochrome c oxidase I (COI) and tRNA-Pro/D-loop of specimens from throughout the Gulf to explore the genetic basis of the colour morphs. Two highly divergent (HKY + I distance = 11.9% for COI), reciprocally monophyletic lineages were identified, consistent with the presence of two parapatric species. A 30-km gap between the distributions of mitochondrial lineages roughly corresponds to a hypothesized former seaway across the Baja California peninsula north of La Paz, although the estimated divergence time (1.84 million years ago) is more recent than the hypothetical seaway (3-4 million years ago). Surprisingly, the distribution of mitochondrial species is not congruent with the distribution of either male or female colour morphs. Our analysis also revealed significant population differentiation within both species and no shared haplotypes among populations. The northern Gulf species includes four populations (NB, CB, NM and CM) corresponding to northern and central Baja and northern and central mainland sites, while the Cape species includes two populations (SB and SM) corresponding to the Baja and mainland sides of the southern Gulf. The NB/CB division corresponds to a hypothesized Plio-Pleistocene mid-peninsular seaway. The level of genetic divergence documented in this lineage is extraordinary for a marine fish with a pelagic larval stage within a semi-enclosed basin.

This study revises the taxonomic status of the formerly monotypic Archinomidae, which is nested within paraphyletic Amphinomidae according to recent phylogenetic work. We focused our taxonomic sampling to evaluate the affinities of Notopygos and genera classified as ‘fusiform’ in body shape, including Archinome and Chloeia. Prior to this study, the phylogenetic placement of Notopygos had not been evaluated. We inferred the phylogenetic relationships of Notopygos within Amphinomidae based on nuclear and mitochondrial markers, and cytochrome c oxidase subunit I genetic divergences of five Notopygos species, including the newly described Notopygos kekooa sp. n. from the Gulf of California. The phylogenetic and morphological evidence, now including Notopygos species, justified the establishment of two subfamilies within Amphinomidae. In accordance with ICZN Article 36 (Principle of Coordination), both subfamilies are presented as status novus in the nomenclature ranks.

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Background In the Tropical Eastern Pacific (TEP), four species of parrotfishes with complex phylogeographic histories co-occur in sympatry on rocky reefs from Baja California to Ecuador: Scarus compressus, S. ghobban, S. perrico, and S. rubroviolaceus. The most divergent, S. perrico, separated from a Central Indo-Pacific ancestor in the late Miocene (6.6 Ma). We tested the hypothesis that S. compressus was the result of ongoing hybridization among the other three species by sequencing four nuclear markers and a mitochondrial locus in samples spanning 2/3 of the latitudinal extent of the TEP. Results A Structure model indicated that K = 3 fit the nuclear data and that S. compressus individuals had admixed genomes. Our data could correctly detect and assign pure adults and F1 hybrids with > 0.90 probability, and correct assignment of F2s was also high in some cases. NewHybrids models revealed that 89.8% (n = 59) of the S. compressus samples were F1 hybrids between either S. perrico × S. ghobban or S. perrico × S. rubroviolaceus. Similarly, the most recently diverged S. ghobban and S. rubroviolaceus were hybridizing in small numbers, with half of the admixed individuals assigned to F1 hybrids and the remainder likely > F1 hybrids. We observed strong mito-nuclear discordance in all hybrid pairs. Migrate models favored gene flow between S. perrico and S. ghobban, but not other species pairs. Conclusions Mating between divergent species is giving rise to a region-wide, multispecies hybrid complex, characterized by a high frequency of parental and F1 genotypes but a low frequency of > F1 hybrids. Trimodal structure, and evidence for fertility of both male and female F1 hybrids, suggest that fitness declines sharply in later generation hybrids. In contrast, the hybrid population of the two more recently diverged species had similar frequencies of F1 and > F1 hybrids, suggesting accelerating post-mating incompatibility with time. Mitochondrial genotypes in hybrids suggest that indiscriminate mating by male S. perrico is driving pre-zygotic breakdown, which may reflect isolation of this endemic species for millions of years resulting in weak selection for conspecific mate recognition. Despite overlapping habitat use and high rates of hybridization, species boundaries are maintained by a combination of pre- and post-mating processes in this complex.

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The palaemonid genus Sandyella includes S. tricornuta (Isla María Madre, Mexico), S. mclaughlinae, S. bicornuta, S. quadricornuta and S. sexicornuta (Clipperton Island, France). These species were first described in the genus Chacella based on collections of few individuals and limited to no ecological information. Sandyella was later erected to differentiate Chacella kerstitchi from Chacella tricornuta and Chacella mclaughlinae. The remaining three Chacella species (<3 mm cephalothorax length) were later also moved to Sandyella and distinguished mainly based on variation in the less than three protuberances on the cephalothorax and number of protuberances on the abdomen. Since their description from their type localities, only Sandyella tricornuta has been additionally recorded from Bahía de La Paz, Mexico. Collections done at 13 locations along the Gulf of California (2009–2010) yielded 2,905 specimens including representatives of all Sandyella species as epibionts of 57 black coral colonies Antipathes galapagensis, which prompted a closer taxonomic examination. Based on observations of live and preserved specimens, including type material, population cephalothorax size frequency and mitochondrial COI data, we inferred that all current Sandyella species (a) exhibit three protuberances on the cephalothorax; (b) cephalothorax length and number of protuberances appear to be progressive among species; (c) species exhibit high COI sequence similarity; and d) the five Sandyella species were observed cohabiting the same black coral colony. Therefore, we conclude that the five current Sandyella species are in fact distinct ontogenetic stages of a single species, S. tricornuta, and our results of a morphological Bayesian analysis led us conclude that this species belongs to the genus Sandyella rather than Chacella.