Salamanders are the only living tetrapods capable of fully regenerating limbs. The discovery of salamander lineage-specific genes (LSGs) expressed during limb regeneration suggests that this capacity is a salamander novelty. Conversely, recent paleontological evidence supports a deeper evolutionary origin, before the occurrence of salamanders in the fossil record. Here we show that lungfishes, the sister group of tetrapods, regenerate their fins through morphological steps equivalent to those seen in salamanders. Lungfish de novo transcriptome assembly and differential gene expression analysis reveal notable parallels between lungfish and salamander appendage regeneration, including strong downregulation of muscle proteins and upregulation of oncogenes, developmental genes and lungfish LSGs. MARCKS-like protein (MLP), recently discovered as a regeneration-initiating molecule in salamander, is likewise upregulated during early stages of lungfish fin regeneration. Taken together, our results lend strong support for the hypothesis that tetrapods inherited a bona fide limb regeneration programme concomitant with the fin-to-limb transition.
Salamanders and lungfishes are the only sarcopterygians (lobe-finned vertebrates) capable of paired appendage regeneration, regardless of the amputation level. Among actinopterygians (ray-finned fishes), regeneration after amputation at the fin endoskeleton has only been demonstrated in polypterid fishes (Cladistia). Whether this ability evolved independently in sarcopterygians and actinopterygians or has a common origin remains unknown. Here we combine fin regeneration assays and comparative RNA-sequencing (RNA-seq) analysis of Polypterus and axolotl blastemas to provide support for a common origin of paired appendage regeneration in Osteichthyes (bony vertebrates). We show that, in addition to polypterids, regeneration after fin endoskeleton amputation occurs in extant representatives of 2 other nonteleost actinopterygians: the American paddlefish (Chondrostei) and the spotted gar (Holostei). Furthermore, we assessed regeneration in 4 teleost species and show that, with the exception of the blue gourami (Anabantidae), 3 species were capable of regenerating fins after endoskeleton amputation: the white convict and the oscar (Cichlidae), and the goldfish (Cyprinidae). Our comparative RNA-seq analysis of regenerating blastemas of axolotl and Polypterus reveals the activation of common genetic pathways and expression profiles, consistent with a shared genetic program of appendage regeneration. Comparison of RNA-seq data from early Polypterus blastema to single-cell RNA-seq data from axolotl limb bud and limb regeneration stages shows that Polypterus and axolotl share a regeneration-specific genetic program. Collectively, our findings support a deep evolutionary origin of paired appendage regeneration in Osteichthyes and provide an evolutionary framework for studies on the genetic basis of appendage regeneration.
Salamanders and lungfishes are the only sarcopterygians (lobe-finned vertebrates) capable of complete limb and paired fin regeneration, respectively. Among actinopterygians (ray-finned fishes), regeneration after amputation at the fin endoskeleton has only been demonstrated in Polypterid fishes (Cladistia). Whether complete appendage regeneration in sarcopterygians and actinopterygians evolved independently or has a common origin remains unknown. Here we combine fin regeneration assays and comparative RNA-seq analysis to provide support for a common origin of a paired appendage regeneration in osteichthyes (bony vertebrates).We show that, in addition to Polypterids, regeneration after fin endoskeleton amputation occurs in extant representatives of all major actinopterygian clades: the American paddlefish, (Chondrostei), the spotted gar (Holostei), as well as in two cichlid species, the white convict and the oscar (Teleostei). Our comparative RNA-seq analysis of regenerating blastemas of axolotl and Polypterus reveals the activation of common genetic pathways and expression profiles, consistent with a pan-osteichthyes genetic program of appendage regeneration.Collectively, our findings support a deep evolutionary origin of paired appendage regeneration in osteichthyes and provide an evolutionary framework for studies on the genetic basis of appendage regeneration. Δ ΔCT method. methods 25, 402-408 (2001).
The unique eyes of the four-eyed fish Anableps anableps have long intrigued biologists. Key features associated with the bulging eye of Anableps include the expanded frontal bone and the duplicated pupils and cornea. Furthermore, the Anableps retina expresses different photoreceptor genes in dorsal and ventral regions, potentially associated with distinct aerial and aquatic stimuli. To gain insight into the developmental basis of the Anableps unique eye, we examined neurocranium and eye ontogeny, as well as photoreceptor gene expression during larval stages. First, we described six larval stages during which duplication of eye structures occurs. Our osteological analysis of neurocranium ontogeny revealed another distinctive Anablepid feature: an ossified interorbital septum partially separating the orbital cavities. Furthermore, we identified the onset of differences in cell proliferation and cell layer density between dorsal and ventral regions of the retina. Finally, we show that differential photoreceptor gene expression in the retina initiates during development, suggesting that it is inherited and not environmentally determined. In sum, our results shed light on the ontogenetic steps leading to the highly derived Anableps eye.
Infection by the acantocephalan Neoechinorhynchus buttnerae is considered one of most important concerns for tambaqui fish (Colossoma macropomum ) production. Treatment strategies have been the focus of several in vivo studies; however, few studies have been undertaken on in vitro protocols for parasite maintenance. The aim of the present study was to develop the best in vitro culture condition for N. buttnerae to ensure its survival and adaptation out of the host to allow for the testing of substances to be used to control the parasite. To achieve this, parasites were collected from naturally infected fish and distributed in 6-well culture plates under the following treatments in triplicate: 0.9% NaCl, sterile tank water, L-15 Leibovitz culture medium, L-15 Leibovitz + agar 2% culture medium, RPMI 1640 culture medium, and RPMI 1640 + agar 2% culture medium. The plates containing the parasites were maintained at 24 °C, 28 °C, and 32 °C. The RPMI 1640 + agar 2% culture medium showed the best survival of 24 days at 24 °C. No body alterations such as swollen parasites, body deformation, dehydration and hardening were observed in the RPMI 1640 + 2% culture medium.
The pelvic fins of male South American lungfish, Lepidosiren paradoxa, are adorned with a distinctive array of filaments, which grow and become highly vascularized during the breeding season. The resemblance between these pelvic fin filaments (PFFs) and external gills of other vertebrates suggested that this gill-like structure was used for physiological gas exchange. It has been proposed that the unique pelvic fin of male L. paradoxa is used for release of oxygen from its blood into the environment in order to aerate its nesting brood, or, conversely, as an auxiliary respiratory organ by absorbing oxygen from the environment into its bloodstream. Here, we employed histology, scanning electron microscopy (SEM) and quantitative PCR (qPCR) to assess whether the morphology and molecular profile of PFFs are compatible with a role in gas exchange. First, we closely examined its external morphology and showed that PFFs develop from short papillae during the rainy season, but remain covered by a thick nonvascularized epithelium. Histological examination confirmed that capillaries within the filaments are separated from the exterior by a basement membrane and a stratified epithelium composed of four to five cell layers. In addition, SEM analysis revealed significant differences between the fin filament epithelium and typical gill epithelium. Finally, our qPCR results showed that five genes commonly expressed in gills were downregulated in PFFs relative to their expression in regular pectoral fin epidermis. Collectively, our results do not directly support a role for PFFs, commonly referred to as "limb gills", in oxygen release or uptake.
O objetivo deste trabalho foi enriquecer biscoitos com prote�na de pescado, para estimular o consumo entre crian�as de escolas p�blicas. Devido o baixo consumo determinado pela FAO, e com base nos dados de que o pescado tem um alto valor comercial, perante uma popula��o de baixa renda, utilizamos neste trabalho peixe com baixo valor comercial, como a cururuca (Micropogonias furnieri), esse peixe foi adquirido na feira de S�o Lu�s, levado ao laborat�rio da Universidade Estadual do Maranh�o para a retirada da CMS (Carne mecanicamente separada e retirado a umidade na estufa a 105� C e em seguida foi acrescentada na propor��o de 10% em rela��o aos demais ingredientes, na massa do biscoito, ap�s a massa pronta, foram modelados no multimix sova f�cil e assados no forno a 200 �C e embalados em sacos pl�sticos ziploc e selados, para manter longe de microorganismos e ent�o foram realizados os testes microbiol�gicos, onde foi verificada a aus�ncia de fungos e bact�rias e tamb�m testes f�sico-qu�micos, para identifica��o dos minerais, lip�deos e prote�nas e por fim o teste sensorial, que foi aplicado na escola Maria Alice Coutinho, obtendo assim uma boa aceita��o entre os alunos nas idades de 09 a 13 anos, alunos estes que foram escolhidos aleatoriamente e com o resultado do teste sensorial, conclui-se que os biscoitos enriquecidos com prote�na de pescado tiveram uma alta aceitabilidade entre crian�as, podendo assim estimular o consumo cada vez maior na popula��o de pescado no estado do Maranh�o.
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