A general design strategy for the synthesis of cystine-based peptide nanotubes is described. The
design essentially involves closing of the polymethylene chains with cystine diOMe. The cystine-based nanotubes are constructed by the self-assembly of a simple cyclobisamide building block, a
key structural feature of which is the presence of two amide groups at almost opposite poles of the
ring. A large variety of cyclobisamides with the general structure cyclo(−CO−(CH2)
n
−CO−Cyst−)
have been prepared by a single-step procedure involving the condensation of 1,ω-alkane dicarbonyl
dichloride [(CH2)
n
(COCl)2, n = 2, 3, ..., 10, 20] with cystine diOMe providing macrocyclic bisamides
with ring size varying from 14 to 30 members. Single-crystal X-ray studies with four members (n
= 4, 6, 8, and 10, respectively) have shown that the polymethylene-bridged cystine-based
cyclobisamides possess the intrinsic property of self-assembling into highly ordered parallel arrays
of solid-state nanotubes. The hydrogen-bonded cystine tubes are hollow and open ended and extend
to infinity. The interior of the tubes is totally hydrophobic. As a result, the polymethylene-bridged
peptide tubes (a) are able to enhance the solubility of highly lipophilic compounds in water, as
demonstrated here, with pyrene and perylene polycyclic arenes, (b) are able to bind to fluorescent
probe dyes such as Nile Red, and (c) can even induce an ordered secondary structure in linear
peptides as shown here with the 26-residue bee-venom peptide melittin, in the 30-membered cystine
tubule. Crystallographic parameters are (C14H22N2O6S2, P21212) a = 16.489(1) Å, b = 23.049(1) Å,
c = 4.864(1) Å; (C16H26N2O6S2, P21212) a = 19.171(2) Å, b = 21.116(2) Å, c = 5.0045(4) Å;
(C18H30N2O6S2, P212121) a = 5.022(1) Å, b = 17.725(3) Å, c = 25.596(2) Å; and (C20H34N2O6S2, C2)
a = 40.698(15) Å, b = 5.083(3) Å, c = 12.105(5) Å, β = 99.66(3)°.