Modulated optical nanoprobes (MOONs) are microscopic (spherical and aspherical) fluorescent particles designed to emit varying intensities of light in a manner that depends on particle orientation. MOONs can be prepared over a broad size range, allowing them to be tailored to applications including intracellular sensors, using submicrometer MOONs, and immunoassays, using 1−10 μm MOONs. When particle orientation is controlled remotely, using magnetic fields (MagMOONs), it allows modulation of fluorescence intensity in a selected temporal pattern. In the absence of external fields, or material that responds to external fields, the particles tumble erratically due to Brownian thermal forces (Brownian MOONs). These erratic changes in orientation cause the MOONs to blink. The temporal pattern of blinking reveals information about the local rheological environment and any forces and torques acting on the MOONs, including biomechanical forces as observed in macrophages. The rotational diffusion rate of Brownian MOONs is inversely proportional to the particle volume and hydrodynamic shape factor, for constant temperature and viscosity. Changes in the particle volume and shape due to binding, deformation, or aggregation can be studied using the temporal time pattern from the probes. The small size and the large number of MOONs that can be viewed simultaneously provide local measurements of physical properties, in both homogeneous and inhomogeneous media, as well as global statistical ensemble properties.

In this work, sensing magnetic microparticles were used to probe both the local pH and the viscosity-dependent nonlinear rotational behavior of the particles. The latter resulted from a critical transition marking a driven particle's crossover from phase-locking to phase-slipping with an externally rotating magnetic field, i.e., a sudden breakdown in its linear response that can be used to measure a variety of physical quantities. The transition from simple rotation to wobbling is described both theoretically and experimentally. The ability to measure both chemical and physical properties of a system could enable simultaneous monitoring of chemical and physical interactions in biological or other complex fluid microsystems.

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Inappropriate antibiotic use is a major factor contributing to the emergence and spread of antimicrobial resistance. The long turnaround time (over 24 hours) required for clinical antimicrobial susceptibility testing (AST) often results in patients being prescribed empiric therapies, which may be inadequate, inappropriate, or overly broad-spectrum. A reduction in the AST time may enable more appropriate therapies to be prescribed earlier. Here we report on a new diagnostic asynchronous magnetic bead rotation (AMBR) biosensor droplet microfluidic platform that enables single cell and small cell population growth measurements for applications aimed at rapid AST. We demonstrate the ability to rapidly measure bacterial growth, susceptibility, and the minimum inhibitory concentration (MIC) of a small uropathogenic Escherichia coli population that was confined in microfluidic droplets and exposed to concentrations above and below the MIC of gentamicin. Growth was observed below the MIC, and no growth was observed above the MIC. A 52% change in the sensor signal (i.e. rotational period) was observed within 15 minutes, thus allowing AST measurements to be performed potentially within minutes.

Continuous growth of individual bacteria has been previously studied by direct observation using optical imaging. However, optical microscopy studies are inherently diffraction limited and limited in the number of individual cells that can be continuously monitored. Here we report on the use of the asynchronous magnetic bead rotation (AMBR) sensor, which is not diffraction limited. The AMBR sensor allows for the measurement of nanoscale growth dynamics of individual bacterial cells, over multiple generations. This torque-based magnetic bead sensor monitors variations in drag caused by the attachment and growth of a single bacterial cell. In this manner, we observed the growth and division of individual E. coli bacteria, with 80 nanometer sensitivity to the cell length. Over the life cycle of a cell we observed up to 300 % increase in the rotational period of the biosensor due to increased cell volume. In addition, we observed single bacterial cell growth response to antibiotics. This work demonstrates a non-microscopy based approach for monitoring individual cell growth dynamics, including cell elongation, generation time, lag time, and division, as well as their sensitivity to antibiotics. † Corresponding authors: Raoul Kopelman kopelman@umich.edu and Brandon McNaughton bmcnaugh@umich.edu,

Plaque from the root surfaces of 165 subjects (mean age 65.5 years, 22-26 teeth/subject) was analysed for specific bacteria. Five subject groups were defined: A (DMFS 16.4), B (DMFS 55.9), C1 (DMFS 55.6), C2 (DMFS 57.0) and C3 (DMFS 48.1). Groups C1 and C2 had unrestored root surface lesions; Group A, B and C3 were free of unrestored root caries and differed in their coronal caries experience. Streptococcus mutans was isolated more frequently from the root lesions in Groups C1 and C2 than from intact root surfaces in Group A. Streptococcus oralis, Streptococcus mitis 1 and Streptococcus sanguis were isolated more frequently from Group A. The percentage contribution that S. mutans made to plaque from lesions in Groups C1 and C2 was higher than that from plaque in Group A and Actinomyces viscosus serovar 2 contributed more to plaque in Group C1 than in samples from Group A. The percentage counts of Lactobacillus in plaque from lesions in Groups C1 and C2 were higher than those from intact roots in Groups A, B, and C3. Subjects were also grouped on the presence of Lactobacillus and S. mutans in plaque samples. Samples with both organisms (n = 17) showed significantly higher isolation frequencies of specific strains of S. mitis 1 and also A. viscosus serovar 2 compared with samples of plaque containing S. mutans or Lactobacillus. Actinomyces naeslundii serovar 1 was not isolated from samples containing both S. mutans and Lactobacillus. The results confirm an association of S. mutans and Lactobacillus with root surface lesions and suggest a relationship between lesions and A. viscosus serovar 2.

The long turnaround time in antimicrobial susceptibility testing (AST) endangers patients and encourages the administration of wide spectrum antibiotics, thus resulting in alarming increases of multi-drug resistant pathogens. A method for faster detection of bacterial proliferation presents one avenue towards addressing this global concern. We report on a label-free asynchronous magnetic bead rotation (AMBR) based viscometry method that rapidly detects bacterial growth and determines drug sensitivity by measuring changes in the suspension’s viscosity. With this platform, we observed the growth of a uropathogenic Escherichia coli isolate, with an initial concentration of 50 cells per drop, within 20 minutes; in addition, we determined the gentamicin minimum inhibitory concentration (MIC) of the E. coli isolate within 100 minutes. We thus demonstrated a label-free, micro-viscometer platform that can measure bacterial growth and drug susceptibility more rapidly, with lower initial bacterial counts than existing commercial systems, and potentially with any microbial strains.