Background Since the coronavirus disease 2019 outbreak began in the Chinese city of Wuhan on Dec 31, 2019, 68 imported cases and 175 locally acquired infections have been reported in Singapore. We aimed to investigate options for early intervention in Singapore should local containment (eg, preventing disease spread through contact tracing efforts) be unsuccessful. MethodsWe adapted an influenza epidemic simulation model to estimate the likelihood of human-to-human transmission of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in a simulated Singaporean population. Using this model, we estimated the cumulative number of SARS-CoV-2 infections at 80 days, after detection of 100 cases of community transmission, under three infectivity scenarios (basic reproduction number [R 0 ] of 1•5, 2•0, or 2•5) and assuming 7·5% of infections are asymptomatic. We first ran the model assuming no intervention was in place (baseline scenario), and then assessed the effect of four intervention scenarios compared with a baseline scenario on the size and progression of the outbreak for each R 0 value. These scenarios included isolation measures for infected individuals and quarantining of family members (hereafter referred to as quarantine); quarantine plus school closure; quarantine plus workplace distancing; and quarantine, school closure, and workplace distancing (hereafter referred to as the combined intervention). We also did sensitivity analyses by altering the asymptomatic fraction of infections (22·7%, 30·0%, 40·0%, and 50·0%) to compare outbreak sizes under the same control measures.Findings For the baseline scenario, when R 0 was 1·5, the median cumulative number of infections at day 80 was 279 000 (IQR 245 000-320 000), corresponding to 7•4% (IQR 6·5-8·5) of the resident population of Singapore. The median number of infections increased with higher infectivity: 727 000 cases (670 000-776 000) when R 0 was 2·0, corresponding to 19•3% (17•8-20•6) of the Singaporean population, and 1 207 000 cases (1 164 000-1 249 000) when R 0 was 2·5, corresponding to 32% (30•9-33•1) of the Singaporean population. Compared with the baseline scenario, the combined intervention was the most effective, reducing the estimated median number of infections by 99•3% (IQR 92•6-99•9) when R 0 was 1·5, by 93·0% (81•5-99•7) when R 0 was 2·0, and by 78•2% (59·0 -94•4) when R 0 was 2·5. Assuming increasing asymptomatic fractions up to 50·0%, up to 277 000 infections were estimated to occur at day 80 with the combined intervention relative to 1800 for the baseline at R 0 of 1·5.Interpretation Implementing the combined intervention of quarantining infected individuals and their family members, workplace distancing, and school closure once community transmission has been detected could substantially reduce the number of SARS-CoV-2 infections. We therefore recommend immediate deployment of this strategy if local secondary transmission is confirmed within Singapore. However, quarantine and workplace distancing should be prioritised over school cl...

As the novel coronavirus (SARS-CoV-2) continues to spread rapidly across the globe, we aimed to identify and summarize the existing evidence on epidemiological characteristics of SARS-CoV-2 and the effectiveness of control measures to inform policymakers and leaders in formulating management guidelines, and to provide directions for future research. We conducted a systematic review of the published literature and preprints on the coronavirus disease (COVID-19) outbreak following predefined eligibility criteria. Of 317 research articles generated from our initial search on PubMed and preprint archives on 21 February 2020, 41 met our inclusion criteria and were included in the review. Current evidence suggests that it takes about 3-7 days for the epidemic to double in size. Of 21 estimates for the basic reproduction number ranging from 1.9 to 6.5, 13 were between 2.0 and 3.0. The incubation period was estimated to be 4-6 days, whereas the serial interval was estimated to be 4-8 days. Though the true case fatality risk is yet unknown, current model-based estimates ranged from 0.3% to 1.4% for outside China. There is an urgent need for rigorous research focusing on the mitigation efforts to minimize the impact on society.

Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre-including this research content-immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.

Background With more countries exiting lockdown, public health safety requires screening measures at international travel entry points which can prevent the reintroduction or importation of the SARS-CoV-2 virus. Here, we estimate the number of cases captured, quarantining days averted and secondary cases expected to occur with screening interventions. Methods To estimate active case exportation risk from 153 countries with recorded COVID-19 cases and deaths, we created a simple data-driven framework to calculate the number of infectious and upcoming infectious individuals out of 100 000 000 potential travellers from each country, and assessed six importation risk reduction strategies; Strategy 1 (S1) has no screening on entry, S2 tests all travellers and isolates test positives where those who test negative at 7 days are permitted entry, S3 the equivalent but for a 14 day period, S4 quarantines all travellers for 7 days where all are subsequently permitted entry, S5 the equivalent for 14 days and S6 the testing of all travellers and prevention of entry for those who test positive. Results The average reduction in case importation across countries relative to S1 is 90.2% for S2, 91.7% for S3, 55.4% for S4, 91.2% for S5 and 77.2% for S6. An average of 79.6% of infected travellers are infectious upon arrival. For the top 100 exporting countries, an 88.2% average reduction in secondary cases is expected through S2 with the 7-day isolation of test positives, increasing to 92.1% for S3 for 14-day isolation. A substantially smaller reduction of 30.0% is expected for 7-day all traveller quarantining, increasing to 84.3% for 14-day all traveller quarantining. Conclusions The testing and isolation of test positives should be implemented provided good testing practices are in place. If testing is not feasible, quarantining for a minimum of 14 days is recommended with strict adherence measures in place.

BackgroundResponsible for considerable global human morbidity and mortality, Aedes aegypti and Ae. albopictus are the primary vectors of several important human diseases, including dengue and yellow fever. Although numerous variables that affect mosquito survival and reproduction have been recorded at the local and regional scales, many remain untested at the global level, potentially confounding mapping efforts to date.MethodsWe develop a modelling ensemble of boosted regression trees and maximum entropy models using sets of variables previously untested at the global level to examine their performance in predicting the global distribution of these two vectors. The results show that accessibility, absolute humidity and annual minimum temperature are consistently the strongest predictors of mosquito presence. Both vectors are similar in their response to accessibility and humidity, but exhibit individual profiles for temperature. Their mapped ranges are therefore similar except at peripheral latitudes, where the range of Ae. albopictus extends further, a finding consistent with ongoing trapping studies. We show that variables previously identified as being relevant, including maximum and mean temperatures, enhanced vegetation index, relative humidity and population density, are comparatively weak performers.ResultsThe variables identified represent three key biological mechanisms. Cold tolerance is a critical biological parameter, controlling both species’ distribution northwards, and to a lesser degree for Ae. albopictus which has consequent greater inland suitability in North America, Europe and East Asia. Absolute humidity restricts the distribution of both vectors from drier areas, where moisture availability is very low, and increases their suitability in coastal areas. The latter is exacerbated by accessibility with increased likelihood of vector importation due to greater potential for human and trade movement.ConclusionAccessibility, absolute humidity and annual minimum temperatures were the strongest and most robust global predictors of Ae. aegypti and Ae. albopictus presence, which should be considered in control efforts and future distribution projections.

An estimated 105 million dengue infections occur per year across 120 countries, where traditional vector control is the primary control strategy to reduce contact between mosquito vectors and people. The ongoing sars-cov-2 pandemic has resulted in dramatic reductions in human mobility due to social distancing measures; the effects on vector-borne illnesses are not known. Here we examine the pre and post differences of dengue case counts in Malaysia, Singapore and Thailand, and estimate the effects of social distancing as a treatment effect whilst adjusting for temporal confounders. We found that social distancing is expected to lead to 4.32 additional cases per 100,000 individuals in Thailand per month, which equates to 170 more cases per month in the Bangkok province (95% CI: 100–242) and 2008 cases in the country as a whole (95% CI: 1170–2846). Social distancing policy estimates for Thailand were also found to be robust to model misspecification, and variable addition and omission. Conversely, no significant impact on dengue transmission was found in Singapore or Malaysia. Across country disparities in social distancing policy effects on reported dengue cases are reasoned to be driven by differences in workplace-residence structure, with an increase in transmission risk of arboviruses from social distancing primarily through heightened exposure to vectors in elevated time spent at residences, demonstrating the need to understand the effects of location on dengue transmission risk under novel population mixing conditions such as those under social distancing policies.

Background With at least 94 countries undergoing or exiting lockdowns for contact suppression to control the COVID-19 outbreak, sustainable and public health-driven exit strategies are required. Here we explore the impact of lockdown and exit strategies in Singapore for immediate planning. Methods We use an agent-based model to examine the impacts of epidemic control over 480 days. A limited control baseline of case isolation and household member quarantining is used. We measure the impact of lockdown duration and start date on final infection attack sizes. We then apply a 3-month gradual exit strategy, immediately re-opening schools and easing workplace distancing measures, and compare this to long-term social distancing measures. Findings At baseline, we estimated 815 400 total infections (21.6% of the population). Early lockdown at 5 weeks with no exit strategy averted 18 500 (2.27% of baseline averted), 21 300 (2.61%) and 22 400 (2.75%) infections for 6, 8 and 9-week lockdown durations. Using the exit strategy averted a corresponding 114 700, 121 700 and 126 000 total cases, representing 12.07–13.06% of the total epidemic size under baseline. This diminishes to 9 900–11 300 for a late 8-week start time. Long-term social distancing at 6 and 8-week durations are viable but less effective. Interpretation Gradual release exit strategies are critical to maintain epidemic suppression under a new normal. We present final infection attack sizes assuming the ongoing importation of cases, which require preparation for a potential second epidemic wave due to ongoing epidemics elsewhere. Funding Singapore Ministry of Health, Singapore Population Health Improvement Centre.

BackgroundTracking the movement of mosquitoes and understanding dispersal dynamics is essential for the control and prevention of vector-borne diseases. A variety of marking techniques have been used, including dusts and dyes.MethodsIn this study, Aedes aegypti were marked using fluorescent dusts (‘DayGlo’: A-19 Horizon Blue & A-13-N Rocket Red; ‘Brian Clegg’: pink, blue & red), fluorescent paints (‘Brian Clegg’: blue, red & yellow) and metallic gold dust (‘Brian Clegg’). Dusting methods were those previously used in mark-release-recapture experiments, including application with a bulb duster, creation of a dust storm or shaking in a bag.ResultsResults showed marking mosquitoes using a dust storm allowed relatively high survival, compared to unmarked controls (Males: χ2 = 3.24, df = 4, p = 0.07; Females: χ2 = 3.24, df = 4, p = 0.04), and high marking efficiency. Using a bulb duster showed high survival in male mosquitoes (χ2 = 12.59, df = 4, p < 0.000), but low survival in female mosquitoes during the first 15 days of the study (χ2 = 5.17, df = 4, p < 0.05). The bulb duster also had the lowest marking efficiency compared to other dry marking techniques. The bag method showed low survival in males during the first 15 days of the study (χ2 = 5.77, df = 4, p < 0.05). Applying paints had an overall negative impact on survival for males (χ2 = 5.03, df = 3, p < 0.05), but not for females (χ2 = 0.19, df = 3, p = 0.661). Males dusted with DayGlo Horizon Blue dust, and females dusted with DayGlo Rocket Red dust, had the most significant reduction in survivorship in comparison to the control (Males: χ2 = 15.70, df = 6, p < 0.000; Females: χ2 = 24.47, df = 6, p < 0.000). Mosquitoes marked with Brian Clegg gold dust showed mortality rates similar to controls within male mosquitoes (χ2 = 0.18, df = 6, p = 0.674), but significantly lower in females (χ2 = 16.59, df = 6, p < 0.000).ConclusionsThis study showed that marking technique and colour can have a significant impact on the survival and marking coverage of a mosquito.