Human-induced habitat loss and deterioration are shaping connectivity patterns of numerous taxa around the globe. When natural levels of connectivity are disrupted, many potentially synergistic factors (e.g., demographic, genetic and environmental) can jeopardize the future of taxa (Crooks & Sanjayan, 2006;Richardson et al., 2016). In the short-term, isolated populations become more prone to extirpations through random demographic or environmental events as well as the deleterious genetic consequences of increased inbreeding (Bell et al., 2019;Frankham et al., 2002). In the long-term, reduced connectivity decreases the opportunity for

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The Anthropocene has witnessed catastrophic amphibian declines across the globe.A multitude of new, primarily human-induced drivers of decline may lead to extinction, but can also push species onto novel evolutionary trajectories. If these are recognized by amphibian biologists, they can be engaged in conservation actions.Here, we summarize how principles stemming from evolutionary concepts have been applied for conservation purposes, and address emerging ideas at the vanguard of amphibian conservation science. In particular, we examine the consequences of increased drift and inbreeding in small populations and their implications for practical conservation. We then review studies of connectivity between populations at the landscape level, which have emphasized the limiting influence of anthropogenic structures and degraded habitat on genetic cohesion. The rapid pace of environmental changes leads to the central question of whether amphibian populations can cope either by adapting to new conditions or by shifting their ranges. We gloomily conclude that extinction seems far more likely than adaptation or range shifts for most species. That said, conservation strategies employing evolutionary principles, such as selective breeding, introduction of adaptive variants through translocations, ecosystem interventions aimed at decreasing phenotype-environment mismatch, or genetic engineering, may effectively counter amphibian decline in some areas or for some species. The spread of invasive species and infectious diseases has often had disastrous consequences, but has also provided some premier examples of rapid evolution with conservation implications. Much can be done in terms of setting aside valuable amphibian habitat that should encompass both natural and agricultural areas, as well as designing protected areas to maximize the phylogenetic and functional diversity of the amphibian community. We conclude that an explicit consideration and application of evolutionary principles, although certainly not a silver bullet, should increase effectiveness of amphibian conservation in both the short and long term. K E Y W O R D Samphibians, conservation biology, conservation genetics, habitat degradation, host parasite interactions, natural selection and contemporary evolution

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Examining historical and contemporary processes underlying current patterns of genetic variation is key to reconstruct the evolutionary history of species and implement conservation measures promoting their long-term persistence. Combining phylogeographic and landscape genetic approaches can provide valuable insights, especially in regions harboring high levels of biodiversity that are currently threatened by climate and land cover changes, like southern Iberia. We used genetic (mtDNA and microsatellites) and spatial data (climate and land cover) to infer the evolutionary history and contemporary genetic connectivity in a short-range endemic salamander subspecies, Salamandra salamandra longirostris, using a combination of ecological niche modelling, phylogeographic, and landscape genetic analyses. Ecological-based analyses support a role of the Guadalquivir River Basin as a major vicariant agent in this taxon. The lower genetic diversity and greater differentiation of peripheral populations, together with analyses of climatically stable areas throughout time, suggest the persistence of a population in the central part of the current range since the Last Inter Glacial [LIG; ~120,000 -140,000 years BP], and a micro refugium in the eastern end of the range. Habitat heterogeneity plays a major role in shaping patterns of genetic differentiation in S. s. longirostris, with forests representing key areas for its long-term persistence under scenarios of environmental change. Our study stresses the importance of maintaining population genetic connectivity in low-dispersal organisms under rapidly changing environments, and will inform management plans for the long-term survival of this evolutionarily distinct Mediterranean endemic.

Landscape features shape patterns of gene flow among populations, ultimately determining where taxa lay along the continuum between panmixia to complete reproductive isolation. Gene flow can be restricted leading to population differentiation in two non-exclusive ways: "physical isolation", in which geographic distance in combination with the landscape features restricts movement of individuals promoting genetic drift, and "ecological isolation", in which adaptive mechanisms constrain gene flow between different environments via divergent natural selection. In central Iberia, two fire salamander subspecies occur in parapatry across elevation gradients along the Iberian Central System mountains, while in adjacent Mountains of Toledo Region only one of them occurs. By integrating population and landscape genetic analyses, we show a ubiquitous role of physical isolation between and within mountain ranges, with unsuitable landscapes increasing differentiation between populations. However, across the Iberian Central System, we found strong support for a significant contribution of ecological isolation, with low genetic differentiation in environmentally homogeneous areas, but high differentiation across sharp transitions in precipitation seasonality. These patterns are consistent with a significant contribution of ecological isolation in restricting gene flow among subspecies. Overall, our results suggest that ecological divergence contributes to reduce genetic admixture, creating an opportunity for lineages to follow distinct evolutionary trajectories.

AimCurrent genetic variation and differentiation are expected to reflect the effects of past rather than present landscapes due to time lags, that is, the time necessary for genetic diversity to reach equilibrium and reflect demography. Time lags can affect our ability to infer landscape use and model connectivity and also obscure the genetic consequences of recent landscape changes. In this work, we test whether past forest cover better explains contemporary patterns of genetic differentiation in two closely related but ecologically distinct newt species—Lissotriton montandoni and L. vulgaris.LocationCarpathian Mountains and foothills.MethodsGenetic differentiation between populations was related to landscape resistance optimized with tools from landscape genetics, for multiple timeframes, using forest‐cover data from 1963 to 2015. Analyses were conducted for pairs of populations at distances from 1 to 50 km.ResultsWe find evidence for a time lag in L. montandoni, with forest cover from 40 years ago (ca. 10 newt generations) better explaining current genetic differentiation. In L. vulgaris, current genetic differentiation was better predicted by present land‐cover models with lower resistance given to open forests. This result may reflect the generalist ecology of L. vulgaris, its lower effective population sizes and exposure to habitat destruction and fragmentation.Main ConclusionsOur study provides evidence for time lags in L. montandoni, showing that the genetic consequences of landscape change for some species are not yet evident. Our findings highlight the interspecific variation in time lag prevalence and demonstrate that current patterns of genetic differentiation should be interpreted in the context of historical landscape changes.

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