A one-pot synthesis is described to construct a composite of the amino-derivative Zr carboxylate metal–organic framework and silica gel (UiO-66-NH2@silica) as an efficient solid sorbent for hexavalent chromium.
Targeted therapy is an effective standard of care in BRAF-mutated malignant melanoma. However, the duration of tumor remission varies unpredictably among patients, and relapse is almost inevitable. Here, we examine the responses of several BRAF-mutated melanoma cell lines (including isogenic subclones) to BRAF inhibitors. We observe complex response dynamics across cell lines, with short-term responses (<100 h) varying from cell line to cell line. In the long term, however, we observe equilibration of all drug-treated populations into a nonquiescent state characterized by a balanced rate of death and division, which we term the "idling" state, and to our knowledge, this state has not been previously reported. Using mathematical modeling, we propose that the observed population-level dynamics are the result of cells transitioning between basins of attraction within a drug-modified phenotypic landscape. Each basin is associated with a drug-induced proliferation rate, a recently introduced metric of an antiproliferative drug effect. The idling population state represents a new dynamic equilibrium in which cells are distributed across the landscape such that the population achieves zero net growth. By fitting our model to experimental drug-response data, we infer the phenotypic landscapes of all considered melanoma cell lines and provide a unifying view of how BRAF-mutated melanomas respond to BRAF inhibition. We hypothesize that the residual disease observed in patients after targeted therapy is composed of a significant number of idling cells. Thus, defining molecular determinants of the phenotypic landscape that idling populations occupy may lead to "targeted landscaping" therapies based on rational modification of the landscape to favor basins with greater drug susceptibility.
UiO-66-NH2 was constructed on G sheets, metallated with Ni(ii) ions, and used as a precursor to deposit a highly active water oxidation catalyst in an electrochemical surface restructuring process.
A facile, postsynthetic treatment
of a designed composite of pyrimidine-based
porous-organic polymer and graphene (PyPOP@G) with ionic Pt, and the
subsequent uniform electrodeposition of Pt metallic within the pores,
led to the formation of a composite material (PyPOP-Pt@G). The pyrimidine
porous-organic polymer (PyPOP) was selected because of the abundant
Lewis-base binding sites within its backbone, to be combined with
graphene to produce the PyPOP@G composite that was shown to uptake
Pt ions simply upon brief incubation in H2PtCl6 solution in acetonitrile. The XPS analysis of PyPOP@G sample impregnated
with Pt ions confirmed the presence of Pt(II/IV) species and did not
show any signs of metallic nanoparticles, as further confirmed by
transmission electron microscopy. Immediately upon electrochemical
reduction of the Pt(II/IV), metallic Pt (most likely atomistic Pt)
was observed. This approach stands out, as compared to Pt monolayer
deposition techniques atop metal foams, or a recently reported atomic
layer deposition (ALD), as a way of depositing submonolayer coverage
of precious catalysts within the 1–10 nm pores found in microporous
solids. The prepared catalyst platform demonstrated large current
density (100 mA/cm2) at 122 mV applied overpotential for
the hydrogen evolution reaction (HER), with measured Faradaic efficiency
of 97(±1)%. Its mass activity (1.13 A/mgPt) surpasses
that of commercial Pt/C (∼0.38 A/mgPt) at the overpotential
of 100 mV. High durability has been assessed by cyclic and linear
sweep voltammetry, as well as controlled potential electrolysis techniques.
The Tafel plot for the catalyst demonstrated a slope of ∼37
mV/decade, indicating a Heyrovsky-type rate-limiting step in the observed
HER.
Not only have helicase-like transcription factor (HLTF) and SNF2 histone-linker PHD-finger RING-finger helicase (SHPRH) proved to be important players in post-replication repair like their yeast counterpart, Rad5, but they are also involved in multiple biological functions and are associated with several human disorders. We provide here an updated view of their functions, associated diseases, and potential therapeutic approaches.
A facile one-pot, bottom-up approach to construct composite materials of graphene and a pyrimidine-based porous-organic polymer (PyPOP), as host for immobilizing human hemoglobin (Hb) biofunctional molecules, is reported. The graphene was selected because of its excellent electrical conductivity, while the PyPOP was utilized because of its pronounced permanent microporosity and chemical functionality. This approach enabled enclathration of the hemoglobin within the microporous composite through a ship-in-a-bottle process, where the composite of the PyPOP@G was constructed from its molecular precursors, under mild reaction conditions. The composite-enclathrated Fe-protoporphyrin-IX demonstrated electrocatalytic activity toward oxygen reduction, as a functional metallocomplex, yet with a distinct microenvironment provided by the globin protein. This approach delineates a pathway for platform microporous functional solids, where fine-tuning of functionality is facilitated by judicious choice of the active host molecules or complexes, targeting specific application.
R-loops are by-products of transcription that must be tightly regulated to maintain genomic stability and gene expression. Here, we describe a mechanism for the regulation of the R-loop-specific helicase, senataxin (SETX), and identify the ubiquitin specific peptidase 11 (USP11) as an R-loop regulator. USP11 de-ubiquitinates SETX and its depletion increases SETX K48-ubiquitination and protein turnover. Loss of USP11 decreases SETX steady-state levels and reduces R-loop dissolution. Ageing of USP11 knockout cells restores SETX levels via compensatory transcriptional downregulation of the E3 ubiquitin ligase, KEAP1. Loss of USP11 reduces SETX enrichment at KEAP1 promoter, leading to R-loop accumulation, enrichment of the endonuclease XPF and formation of double-strand breaks. Overexpression of KEAP1 increases SETX K48-ubiquitination, promotes its degradation and R-loop accumulation. These data define a ubiquitination-dependent mechanism for SETX regulation, which is controlled by the opposing activities of USP11 and KEAP1 with broad applications for cancer and neurological disease.
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