Quantitative trait loci (QTLs) for frost and drought tolerance, and winter survival in the field, were mapped in meadow fescue (Festuca pratensis Huds.) and compared with corresponding traits in Triticeae and rice to study co-location with putatively orthologous QTLs and known abiotic stress tolerance genes. The genomes of grass species are highly macrosyntenic; however, the Festuca/Lolium and Triticeae homoeologous chromosomes 4 and 5 show major structural differences that is especially interesting in comparative genomics of frost tolerance. The locations of two frost tolerance/winter survival QTLs on Festuca chromosome 5F correspond most likely to the Fr-A1 and Fr-A2 loci on wheat homoeologous group 5A chromosomes. A QTL for long-term drought tolerance on chromosome 3F (syntenic with rice 1) support evidence from introgression of Festuca genome segments onto homoeologous Lolium chromosomes (3L) that this genome region is an excellent source of tolerance towards drought stress. The coincident location of several stress tolerance QTL in Festuca with QTL and genes in Triticeae species, notably dehydrins, CBF transcription factors and vernalisation response genes indicate the action of structural or regulatory genes conserved across evolutionarily distant species.

Sweet potato (Ipomoea batatas L.) is the fifth most important crop in the developing countries after rice, wheat, maize and cassava. The amplified fragment length polymorphism (AFLP) method was used to study the genetic diversity and relationships of sweet potato accessions in the germplasm collection AFLP analysis of 97 sweet potato accessions using ten primer combinations gave a total of 202 clear polymorphic bands. Each one of the 97 sweet potato accessions could be distinguished based on these primer combinations. Estimates of genetic similarities were obtained by the Dice coefficient, and a final dendrogram was constructed with the un-weight pairgroup method using arithmetic average. AFLP-based genetic similarity varied from 0.388 to 0.941, with a mean of 0.709. Cluster analysis using genetic similarity divided the accessions into two main groups suggesting that there are genetic relationships among the accessions. Principal Coordinate analysis confirmed the pattern of the cluster analysis. Analysis of molecular variance revealed greater variation within regions (96.19%) than among regions (3.81%). The results from the AFLP analysis revealed a relatively low genetic diversity among the germplasm accessions and the genetic distances between regions were low. A maximally diverse subset of 13 accessions capturing 97% of the molecular markers diversity was identified. We were able to detect duplicates accessions in the germplasm collection using the highly polymorphic markers obtained by AFLP, which were found to be an efficient tool to characterize the genetic diversity and relationships of sweet potato accessions in the germplasm collection in Tanzania.

In Tanzania sweet potato ranks as the third most important crop after cassava and potato. We studied the phenotypic diversity of morphological plant and root descriptor traits in accessions of the sweet potato germplasm collection of Sokoine University of Agriculture, Morogoro and Sugarcane Research Institute, Kibaha, Tanzania, using phenotypic characters. A total number of 105 sweet potato accessions of different geographic origins were studied in field trials of The Sugarcane Research Institute at Kibaha Tanzania, and data were recorded for 27 phenotypic characters. Estimates of pair-wise phenotypic similarities using the Manhattan coefficient varied from 0.023 to 0.814, with a mean of 0.285. Cluster analysis was conducted using the unweighted pair group method with arithmetic mean (UPGMA) and Principal Coordinate Analysis (PCO). The clustering of phenotypic data resulted in a dendrogram which was discordant with geographic origin and AFLP data. The analysis of variance (ANOVA) revealed highly significant variation among the accessions for 21 out of the 27 characters studied. Phenotypic analyses revealed a wider range of variability than AFLP analyses. Comparison of molecular and phenotypic data using the Mantel test showed a very low correlation (r 2 = 0.0007). Molecular and phenotypic classifications are discordant, and both are necessary to classify the germplasm correctly and to clarify genetic relationships among sweet potato accessions.

Species belonging to the Festuca-Lolium complex are important forage and turf species and as such, have been studied intensively. However, their out-crossing nature and limited availability of molecular markers make genetic studies difficult. Here, we report on saturation of F. pratensis and L. multiflorum genetic maps using Diversity Array Technology (DArT) markers and the DArTFest array.The 530 and 149 DArT markers were placed on genetic maps of L. multiflorum and F. pratensis, respectively, with overlap of 20 markers, which mapped in both species. The markers were sequenced and comparative sequence analysis was performed between L. multiflorum, rice and Brachypodium. The utility of the DArTFest array was then tested on a Festulolium population FuRs0357 in an integrated analysis using the DArT marker map positions to study associations between markers and freezing tolerance. Ninety six markers were significantly associated with freezing tolerance and five of these markers were genetically mapped to chromosomes 2, 4 and 7. Three genomic loci associated with freezing tolerance in the FuRs0357 population co-localized with chromosome segments and QTLs previously identified to be associated with freezing tolerance. The present work clearly confirms the potential of the DArTFest array in genetic studies of the Festuca-Lolium complex. The annotated DArTFest array resources could accelerate further studies and improvement of desired traits in Festuca-Lolium species.

The effect of variable autumn temperatures in combination with decreasing irradiance and daylength 1 on photosynthesis, growth cessation and freezing tolerance was investigated in northern-and southern-2 adapted populations of perennial ryegrass (Lolium perenne L.) and timothy (Phleum pratense L.) 3 intended for use in regions at northern high latitudes. Plants were subjected to three different 4 acclimation temperatures; 12, 6 and 9/3˚C (day/night) for four weeks, followed by one week of cold 5 acclimation at 2˚C under natural light conditions. This experimental setup was repeated at three 6 different periods during autumn with decreasing sums of irradiance and daylengths. Photoacclimation, 7 leaf elongation and freezing tolerance were studied. The results showed that plants cold acclimated 8 during the period with lowest irradiance and shortest day had lowest freezing tolerance, lowest 9 photosynthetic activity, longest leaves and least biomass production. Higher acclimation temperature 10 (12˚C) resulted in lower freezing tolerance, lower photosynthetic activity, faster leaf elongation rate 11 and higher biomass compared to the other temperatures. Photochemical mechanisms were 12 predominant in photoacclimation. The northern-adapted populations had a better freezing tolerance 13 than the southern-adapted except when grown during the late autumn period and at the highest 14 temperature; then there were no differences between the populations. Our results indicate that the 15 projected climate change in the north may reduce freezing tolerance in grasses as acclimation will take 16 place at higher temperatures and shorter daylengths with lower irradiance. 17 18