The precise knowledge of species distribution is a key step in conservation biology. However, species detection can be extremely difficult in many environments, specific life stages and in populations at very low density. The aim of this study was to improve the knowledge on DNA persistence in water in order to confirm the presence of the focus species in freshwater ecosystems. Aquatic vertebrates (fish: Siberian sturgeon and amphibian: Bullfrog tadpoles) were used as target species. In control conditions (tanks) and in the field (ponds), the DNA detectability decreases with time after the removal of the species source of DNA. DNA was detectable for less than one month in both conditions. The density of individuals also influences the dynamics of DNA detectability in water samples. The dynamics of detectability reflects the persistence of DNA fragments in freshwater ecosystems. The short time persistence of detectable amounts of DNA opens perspectives in conservation biology, by allowing access to the presence or absence of species e.g. rare, secretive, potentially invasive, or at low density. This knowledge of DNA persistence will greatly influence planning of biodiversity inventories and biosecurity surveys.
How large herbivores track resource quantity and quality through time has formed the core of an abundance of literature on migratory populations in recent decades. Yet, relating foraging processes and habitat selection patterns in resident populations, where spatial heterogeneity of food resources is fine‐grained and/or where the portion of edible plants (i.e. the foodscape) is low, is challenging. We addressed this issue in a mountain population of chamois Rupicapra rupicapra, an intermediate feeder, whose individuals do not migrate. We relied on a rare combination of data on habitat use of 50 GPS‐collared females and data on the quantity (biomass) and quality (phenology) of edible resources in their landscape, derived from field sampling of vegetation, remote sensing and diet (DNA barcoding). The foodscape of the chamois was composed of a low proportion of the available biomass (<18%), including relatively high‐quality plants, with low spatial covariation between plant phenology and biomass. Chamois avoided areas with a low edible biomass (where the intake rate may be too low) and focused on areas with plants at approximately the flowering stage, whatever the average plant phenological stage available. Due to this constant preference for flowering plants, home range selection ratios therefore shifted during the summer from a selection of more advanced plants in June to their avoidance in August. When the phenology scores of all plants available, rather than edible plants only, were considered, areas with relatively more advanced plants were selected all summer long. This exemplifies that, when traits from edible plants are different from those of all plants available, it is crucial to consider the actual foodscape to decipher forage and habitat selection processes. By integrating species‐specific dimensions of resources in habitat selection studies, we believe understanding of the foraging processes will be improved.
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