We have isolated an Arabidopsis talana cDNA that complements the methyl me efonate-sensltive phenotype of an Escherichia coi double mutant deficient in 3-methyladenine glycosylases (DNA-3-methyladenine glycosidases I and U, EC 3.2.2.20 and 3.2.2.21, respectively, encoded by tag and alkA). ExpressionoftheArabidopsis cDNA enhanes the methyl meh on resistance of the E. coil double mutant by nearly four orders of magnitude. The cDNA corresponds to a single-copy, nely encoded sequence which specifies a predicted 28.1-kDa protein with a charge of +8 at pH 7.0. Enzymatic analysis of extracts prepared from the tnormed mutants indctes that the cDNA encodes a 3-methyladenine glycosylase. The predicted amino acid sequence of the Arabidopsis glycosylase ha significant homology to other eukaryotic 3-methyladenine glycosylases.All living things are subject to DNA damage in a wide variety of forms. Environmental and man-made toxins such as UV light, chemical mutagens, fungal and bacterial toxins, and ionizing radiation result in the formation of cross-links, single-and double-stranded breaks, and chemical adducts in DNA. In addition, because the genome is located in a chemically reactive environment, some amount of DNA damage occurs as an inevitable result of the interaction of nucleic acids with cellular alkylating and oxidizing agents. These modified bases can, in the absence of repair, contribute substantially to the cell's spontaneous mutation rate (1-4). DNA repair mechanisms, which protect the cell from the cytotoxic and mutagenic effects of these lesions, have been demonstrated in a variety of organisms, from bacteriophage to humans. The various pathways for repair include both nucleotide excision repair mechanisms, which repair a broad spectrum of lesions, and more specialized base repair enzymes (largely, though not exclusively, glycosylases).The study of DNA repair, recombination, and replication in plants has lagged far behind the study of these processes in microbial and mammalian systems. Molecular isolation of the genes involved in DNA enzymology in higher plants has been limited to a handful of clones. These include two genes cloned by taking advantage of homologous nucleotide sequences: the Arabidopsis gene for topoisomerase 1 (5) and an apparent homolog of the Escherichia coli recA gene, localized to the chloroplasts, from Arabidopsis and Pisum sativum (6). Hays and coworkers (41, 42) have isolated several Arabidopsis clones on the basis of their ability to partially complement the UV-sensitive phenotype of an E. coli recA-, phr-, uvrC-triple mutant. With the exception of the TOP] clone, the biochemical activities encoded by these cDNAshave not yet been identified.