Infrared spectroscopy is used to investigate the transformation of carboxyl-terminated alkyl chains immobilized on a surface into succinimidyl ester-terminated chains by reaction with an aqueous solution of N-ethyl-N'-(3-(dimethylamino)propyl)carbodiimide (EDC) and N-hydroxysuccinimide (NHS). The acid chains are covalently grafted at the surface of hydrogenated porous silicon whose large specific surface area allows for assessing the activation yield in a semiquantitative way by infrared (IR) spectroscopy and detecting trace amounts of surface products and/or reaction products of small IR cross section. In this way, we rationalize the different reaction paths and optimize the reaction conditions to obtain as pure as possible succinimidyl ester-terminated surfaces. A diagram mapping the surface composition after activation was constructed by systematically varying the solution composition. Results are accounted for by NHS surface adsorption and a kinetic competition between the various EDC-induced surface reactions.

This work demonstrates that well-defined mixed carboxyl-terminated/methyl-terminated alkyl monolayers can be prepared in one step on H-terminated Si(111) via direct photochemical hydrosilylation of undecylenic acid and 1-decene mixtures. As evidenced by AFM imaging and IR spectroscopy, a final rinse in hot acetic acid leaves the functionalized surface atomically smooth and perfectly free of physisorbed contaminants while unwanted material remains atop the monolayer with most other common solvents. The compositional surface chemistry was determined from a truly quantitative IR (ATR geometry) study in the range of 900-4000 cm(-)(1). Results prove that neither surface oxidation nor grafting through the carboxyl end groups occurs. Monolayers are fairly dense for such bulky end groups, with a total molecular surface density of approximately 2.7 10(14) cm(-)(2) corresponding to a surface coverage of 0.35 (maximum theoretical value approximately 0.5). Careful analysis of the CH- and COOH-related IR bands reveals that the composition of the grafted layers is richer in acid chains than the starting grafting mixture. A simple model is presented that shows that the grafting kinetics is about twice as fast for undecylenic acid as for 1-decene. Complementary electrochemical impedance measurements indicate the excellent electronic properties of the interface with a very low density of gap states. They also show that the acid terminal groups promote the penetration of water in the outer part of the organic film.

Efficient functionalization of silicon substrates is important for the development of silicon-based sensors. Organic monolayers directly bonded to hydrogen-terminated silicon substrates via Si−C bonds display enhanced stability toward hydrolytic cleavage. Here, we show that monolayers presenting a high density of terminal azide groups are amenable to bioconjugation with alkynyl-derivatized glycans via a copper-catalyzed azide−alkyne 1,3-dipolar cycloaddition. The prerequisite azide-functionalized silicon surface is fabricated via hydrosilylation of undecylenic acid with hydrogen-terminated silicon substrate followed by reaction of the thus formed monolayer of acid groups with short, bifunctional oligoethylene oxide chains carrying an amine function at one terminus and an azido group at the other. The possibility to functionalize these azido-surfaces with alkynyl-derivatized glycans such as propargyl mannose through a click protocol is demonstrated and evidenced using X-ray photoelectron spectroscopy and Fourier-transform infrared spectroscopy. In addition, the interaction of these mannose-adorned silicon substrates with glycan binding proteins such as Lens culinaris lectin is investigated. The data establishes clearly the specificity of the interaction of this newly fabricated silicon surface for mannose-selective proteins as well as its reusability, thereby demonstrating its potential as a sensor.

Mixed carboxyl-terminated monolayers grafted onto monocrystalline (111) silicon are prepared by photochemical hydrosilylation of undecylenic acid/1-decene mixtures on hydrogenated surfaces. The attachment of a simple primary amine (hexylamine) to the mixed-acid-terminated monolayers is achieved in a physiological buffer by a two-step process using the water-soluble coupling agents N-ethyl-N‘-(3-dimethylaminopropyl)carbodiimide hydrochloride (EDC) and N-hydroxysuccinimide (NHS) to activate the carboxyl terminations. The chemical compositions of the acid-terminated, activated, and amidated monolayers are studied carefully as a function of the morphology of the initial hydrogenated surface (rough or flat) by quantitative FTIR spectroscopy (ATR geometry) coupled with AFM imaging. For the amidation reaction, in situ IR experiments are performed in hexylamine solutions at three different concentrations. A simple model is proposed to explain the sublinear variation of the reaction rate as a function of the amine concentration.

The thermal stability of different organic layers on silicon has been investigated by in situ infrared spectroscopy, using a specially designed variable-temperature cell. The monolayers were covalently grafted onto atomically flat (111) hydrogenated silicon surfaces through the (photochemical or catalytic) hydrosilylation of 1-decene, heptadecafluoro-1-decene or undecylenic acid. In contrast to alkyl monolayers, which desorb as alkene chains around 300 degrees C by the breaking of the Si-C bond through a beta-hydride elimination mechanism, the alkyl layers functionalized with a carboxylic acid terminal group undergo successive chemical transformations. At 200-250 degrees C, the carboxyl end groups couple forming anhydrides, which subsequently decompose at 250-300 degrees C by loss of the functional group. In the case of fluorinated alkyl chains, the C-C bond located between CH2 and CF2 units is first broken at 250-300 degrees C. In either case, the remaining alkyl layer is stable up to 350 degrees C, which is accounted for by a kinetic model involving chain pairing on the surface.

No abstract

The paper reports on a novel surface plasmon resonance (SPR) substrate architecture based on the coating of a gold (Au) or silver (Ag) substrate with 5 nm thin amorphous silicon-carbon alloy films. Ag/a-Si(1-x)C(x):H and Au/a-Si(1-x)C(x):H multilayers are found to provide a significant advantage in terms of sensitivity over both Ag and Au for SPR refractive index sensing. The possibility for the subsequent linking of stable organic monolayers through Si-C bonds is demonstrated. In a proof-of-principle experiment that this structure can be used for real-time biosensing experiments, amine terminated biotin was covalently linked to the acid-terminated SPR surface and the specific streptavidin-biotin interaction recorded.

No abstract