Methionine-rich motifs have an important role in copper trafficking factors, including the CusF protein. Here we show that CusF uses a new metal recognition site wherein Cu(I) is tetragonally displaced from a Met 2 His ligand plane toward a conserved tryptophan. Spectroscopic studies demonstrate that both thioether ligation and strong cation-π interactions with tryptophan stabilize metal binding. This novel active site chemistry affords mechanisms for control of adventitious metal redox and substitution chemistry.In recent years, metal-specific gene regulatory and cation-trafficking proteins have been isolated and demonstrate metal binding motifs with unprecedented coordination chemistry tailored to their function 1 . For example, the CXXC sequence, found in cytosolic copper chaperones and trafficking proteins, provides for facile Cu(I) transfer via low-coordinationnumber anionic intermediates 1,2 . Extracellular or periplasmic copper trafficking domains, however, function in environments that are more oxidizing than the cytosol and frequently have less well understood methionine-rich sequences 3-8 . The cus operon encodes a bacterial copper homeostasis system with several methionine-motif proteins 5,9,10 , including the periplasmic protein CusF, which is thought to serve as copper chaperone or regulator 5,6 . CusF binds Cu(I) in vitro 11 , and a methionine-rich Cu(I) site was proposed 6 based on an apo-CusF structure and NMR chemical shift data. Here we show that metal recognition in CusF involves a strong interaction between a cationic Cu(I)-thioether/imidazole center and the aromatic ring of tryptophan. To our knowledge, such cation-π interactions have not been reported for transition metal receptors or metalloenzyme active sites.Correspondence should be addressed to T.V.O. (t-ohalloran@northwestern.edu). 6 These authors contributed equally to this work.Published online at http://www.nature.com/naturechemicalbiology Reprints and permissions information is available online at

Guest exchange in an M4L6 supramolecular host has been evaluated to determine whether host rupture is required for guest ingress and egress. Two mechanistic models were evaluated: one requiring partial dissociation of the host structure to create a portal for guest passage and one necessitating deformation of the host structure to create a dilated aperture for guest passage without host rupture. Three related lines of inquiry support the nondissociative guest exchange mechanism. (a) Equally facile guest exchange is observed in labile ([Ga4L6]12-) and inert ([Ti4L6]8- and [Ge4L6]8-) hosts. (b) Molecular mechanics calculations demonstrate that the structural deformations required for enlargement of an M4L6 aperture in a nonrupture or nondissociative guest exchange mechanism are plausible. (c) As predicted by the calculations, CoCp*2+, a sterically demanding guest, significantly inhibits guest exchange. These results bring new insight to the application of the M4L6 supramolecular host for encapsulated reaction chemistry for which there are now several examples.

Over the last decade, cysteine thiolate ligands have been shown to be critical to the Cu(I) (cuprous) binding chemistry of many cytosolic metallochaperone and metalloregulatory proteins involved in copper physiology. More recently, the thioether group of methionine has begun to emerge as an important Cu(I) ligand for trafficking proteins in more oxidizing cellular environments.

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Guest exchange in an M(4)L(6) supramolecular assembly was previously demonstrated to proceed through a nonrupture mechanism in which guests squeeze through apertures in the host structure and not through larger portals created by partial assembly dissociation. Focusing on the [Ga(4)L(6)](12-) assembly [L = 1,5-bis(2',3'-dihydroxybenzamido)naphthalene], the host-guest kinetic behavior of this supramolecular capsule is defined. Guest self-exchange rates at varied temperatures and pressures were measured to determine activation parameters, revealing negative DeltaS and positive DeltaV values [PEt(4)(+): DeltaH = 74(3) kJ mol(-1), DeltaS = -46(6) J mol(-1) K(-1), k(298) = 0.003 s(-)); NEt(4)(+): DeltaH = 69(2) kJ mol(-1), DeltaS = -52(5) J mol(-1) K(-1), k(298) = 0.009 s(-1); NMe(2)Pr(2)(+): DeltaH = 52(2) kJ mol(-1), DeltaS = -56(7) J mol(-1) K(-1), DeltaV = +13(1) cm(3) mol(-1), k(298) = 4.4 s(-1); NPr(4)(+): DeltaH = 42(1) kJ mol(-1), DeltaS = -102(4) J mol(-1) K(-1), DeltaV = +31(2) cm(3) mol(-1), k(298) = 1.4 s(-1)]. In PEt(4)(+) for NEt(4)(+) exchange reactions, egress of the initial guest (G1) is found to be rate determining, with increasing G1 and G2 (the displacing guest) concentrations inhibiting guest exchange. This inhibition is explained by the decreased flexibility of the host imparted by exterior, or exohedral, guest interactions by both the G1 and G2 guests. Blocking the exohedral host sites with high concentrations of the smaller NMe(4)(+) cation (a weak endohedral guest) enhances PEt(4)(+) for NEt(4)(+) guest exchange rates. Finally, guest displacement reactions also demonstrate the sensitivity of guest exchange to thermodynamic endohedral guest binding affinities. When the initial guest (G1) has a weaker affinity for the host, G2 concentration dependence is observed in addition to dependence on the G2 binding strength.

The molecular structure of the spontaneously assembled supramolecular cluster [M4L6] n− has been explored with different metals (M = GaIII, FeIII, TiIV) and different encapsulated guests (NEt4 +, BnNMe3 +, Cp2Co+, Cp*2Co+) by X-ray crystallography. While the identity of the metal ions at the vertices of the M4L6 structure is found to have little effect on the assembly structure, encapsulated guests significantly distort the size and shape of the interior cavity of the assembly. Cations on the exterior of the assembly are found to interact with the assembly through either π−π, cation−π, or CH−π interactions. In some cases, the exterior guests interact with only one assembly, but cations with the ability to form multiple π−π interactions are able to interact with adjacent assemblies in the crystal lattice. The solvent accessible cavity of the assembly is modeled using the rolling probe method and found to range from 253−434 Å3, depending on the encapsulated guest. On the basis of the volume of the guest and the volume of the cavity, the packing coefficient for each host−guest complex is found to range from 0.47−0.67.

Herein we describe a molecular structure, formed from labile components, that exhibits structural memory. The macroscopic model in Figure 1 demonstrates this principle. The wooden icosohedral puzzle retains its structure (without any glue) despite dissociation of several pieces. These labile pieces can be removed and replaced without disassembly of the original structure. The structure itself is retained, or remembered, throughout the process of component substitution. In short, structural memory describes the substitution process itself and not merely the starting and ending states of the system.Like the wooden puzzle, discrete supramolecular assemblies exhibit well-defined topologies, specified by the arrangement and connectivity of the constituent molecular components. If these molecular components can be substituted in a stepwise fashion and the supramolecular structure still persists, then there is structural memory. We describe such structural memory-as reported by retention of chirality-in Martin,