Bacteriophages infecting Salmonella spp. were isolated from sewage using soft agar overlays containing three Salmonella serovars and assessed with regard to their potential to control food-borne salmonellae. Two distinct phages, as defined by plaque morphology, structure and host range, were obtained from a single sample of screened sewage. Phage FGCSSa1 had the broadest host range infecting six of eight Salmonella isolates and neither of two Escherichia coli isolates. Under optimal growth conditions for S. Enteritidis PT160, phage infection resulted in a burst size of 139 PFU but was apparently inactive at a temperature typical of stored foods (5 degrees C), even at multiplicity of infection values in excess of 10 000. While neither isolate had characteristics that would make them candidates for biocontrol of Salmonella spp. in foods, phage FGCSSa1 behaved unusually when grown on two Salmonella serotypes at 37 degrees C in that the addition of phages appeared to retard growth of the host, presumably by the lysis of a fraction of the host cell population.
A national quantitative survey of Campylobacter jejuni and Campylobacter coli in 1,011 uncooked retail meat samples (beef, unweaned veal, chicken, lamb and mutton, and pork) was undertaken from August 2003 to June 2004 to establish baseline proportionality data. The presence, number, and type of Campylobacter present in each sample was assessed. Prevalences of C. jejuni and C. coli were 89.1% in chicken, 9.1% in pork, 6.9% in lamb and mutton, 3.5% in beef, and 10% in unweaned veal. C. jejuni was identified in the majority of positive samples (246 of 259). In chicken samples positive for C. jejuni, 40.2% had counts of <0.3 most probable number (MPN)/g, 50.5% had 0.3 to 10.0 MPN/g, 8.8% had 10.1 to 50.0 MPN/g, and 0.5% had 110 MPN/g. In other meats (49 samples), Campylobacter counts were < or = 0.3 MPN/g, except for one unweaned veal sample at > 10.9 MPN/g. Penner serotyping and SmaI macrorestriction genotyping using pulsed-field gel electrophoresis with 247 isolates revealed 17 Penner serotypes and 56 electrophoresis profiles. Seven Penner serotypes (HS1 complex, 2, 4 complex, 6, 11, 27, and 42) were represented by 10 or more isolates from chicken. When data from both typing methods were combined, 62 sero-genotypes were generated. In a comparison of these sero-genotypes with historical data for isolates from human cases, 71% of the beef isolates, 50% of the lamb and mutton isolates, 50% of the pork isolates, 41% of the chicken isolates, and 25% of the unweaned veal isolates were common to both sources. These results provide baseline proportionality profiles of Campylobacter in these five meats and will facilitate exposure assessment in combination with other information such as consumption data and subsequent quantitative risk assessment.
To overcome some of the deficiencies with current molecular typing schema for Campylobacter spp., we developed a prototype PCR binary typing (P-BIT) approach. We investigated the distribution of 68 gene targets in 58 Campylobacter jejuni strains, one Campylobacter lari strain, and two Campylobacter coli strains for this purpose. Gene targets were selected on the basis of distribution in multiple genomes or plasmids, and known or putative status as an epidemicity factor. Strains were examined with Penner serotyping, pulsed-field gel electrophoresis (PFGE; using SmaI and KpnI enzymes), and multilocus sequence typing (MLST) approaches for comparison. P-BIT provided 100% typeability for strains and gave a diversity index of 98.5%, compared with 97.0% for SmaI PFGE, 99.4% for KpnI PFGE, 96.1% for MLST, and 92.8% for serotyping. Numerical analysis of the P-BIT data clearly distinguished strains of the three Campylobacter species examined and correlated somewhat with MLST clonal complex assignations and with previous classifications of "high" and "low" risk. We identified 18 gene targets that conferred the same level of discrimination as the 68 initially examined. We conclude that P-BIT is a useful approach for subtyping, offering advantages of speed, cost, and potential for strain risk ranking unavailable from current molecular typing schema for Campylobacter spp.Campylobacter species, particularly C. jejuni subsp. jejuni (hereafter C. jejuni), represent the most commonly reported bacterial cause of gastroenteritis in humans in the developed world (47), with New Zealand having one of the highest rates of infection (55). The sheer scale of infection makes concerted epidemiological studies difficult, as does the extremely wide distribution of the organism, found in all major avian and mammalian food animals, their products, and indeed environments. Moreover, many Campylobacter spp. are susceptible to spontaneous genetic change through a variety of mechanisms that can result in conflicting data for genetic typing methods aiming to establish a molecular epidemiological link between strains (reviewed by On and colleagues [47]).The poor discrimination of phenotypic typing methods led to intense developments in molecular epidemiological tools for more accurate data. Although a wide range of genotypic methods have been described (47), two methods are now more commonly used by laboratories worldwide. The availability of standardized protocols for macrorestriction profiling with pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) have facilitated major contributions to our understanding of the epidemiology of these bacteria. Nonetheless, issues remain, notably relating to the speed, cost, and ease of data analysis from these methods. Furthermore, although MLST has proven useful in evaluating the original host of a given strain, no current methods provide information on the relative risk to human health from individual strains. Various studies, including those identifying stable clones found in humans a...
Since 2002, New Zealand's incidence of campylobacteriosis has exceeded 300 cases per 100,000 people per annum. To evaluate genetic variation in human isolates, 183 Campylobacter isolates were collected from a single clinical laboratory in Christchurch: 77 during an 8-week period in spring, and the rest 3 months later over a second 8-week period in autumn. Isolates were identified to the species level and subtyped using Penner serotyping (Campylobacter jejuni only) and pulsed-field gel electrophoresis (PFGE) using both SmaI and KpnI. Approximately two-thirds of the isolates could be grouped into clusters of between 2 and 26 isolates with indistinguishable SmaI and KpnI patterns. Less than 10% of the isolates were of the same type between the two sampling periods. The epidemiological relevance of the PFGE clusters was supported by temporal clustering, some spatial clustering, and some statistically significant demographic similarities among cases in a cluster. Conversely, patient cases yielding isolates which did not cluster with isolates from other cases were more likely to report recent overseas travel and less likely to live within larger urban centers. To identify whether these clusters actually represent common-source outbreaks, however, would require the detailed, rapid, and reiterative epidemiological investigation of cases within a PFGE cluster. The combined and timely application of subtyping and epidemiological investigation would appear to be a promising strategy for understanding campylobacteriosis in New Zealand.
This paper presents a correlation for predicting the behavior of a water cone as it builds from the static water-oil contact to breakthrough conditions. The correlation is partly empirical and involves dimensionless groups of reservoir and fluid properties and of production and well characteristics. The groups were deduced from the scaling criteria for the immiscible displacement of oil by water. The correlation is based on a limited amount of experimental data from a laboratory, sand-packed model and on results from a computer program for a two-dimensional, incompressible system. Because the correlating groups are dimensionless, they can be used to estimate the performance of water coning cases not specifically considered in the correlation. However, despite its dimensionless nature, the correlation is no completely general and will not provide meaningful estimates of cone behavior in many situations. INTRODUCTION AND BACKGROUND The production of water from oil wells is a common occurrence which increases the cost of producing operations and may reduce the efficiency of the depletion mechanism and the recovery of reserves. We will deal with one cause of this water production, namely, coning. The coning of water into a producing well is caused by pressure gradients established around the wellbore by the production of fluids from the well. These pressure gradients can raise the water-oil contact near the well where gradients are most severe. Gravity forces that arise from fluid density differences counterbalance the flowing pressure gradients and tend to keep the water out of the oil zone. Therefore, at any given time, there is a balance between gravitational and viscous forces at points on and away from the completion interval. When the dynamic forces at the wellbore exceed gravitational forces, a cone of water will ultimately break into the well to produce water along with the oil. We can expand on this basic visualization of coning by introducing the concepts of stable cone, unstable cone and critical production rate. For instance, if a well is produced at a constant rate and the pressure gradients in the drainage system have become constant, a steady-state condition is reached. If, at this condition, the dynamic forces at the well are less than the gravity forces, then the water or gas cone that has formed will not extend to the well. Moreover, the cone will neither advance nor recede, thus establishing what is known as a stable cone. Conversely, if the pressure in the system is in an unsteady-state condition, then an unstable cone will continue to advance until steady-state conditions prevail. If the flowing pressure drop at the well is sufficient to overcome the gravity forces, the unstable cone will grow and ultimately break into the well. It is important to note that in a realistic sense, stable cones may only be "pseudostable" because the drainage system and pressure distribution generally change. For example, with reservoir depletion, the water-oil contact may advance toward the completion interval, thereby increasing chances for coning. As another example, reduced productivity due to well damage requires a corresponding increase in the flowing pressure drop to maintain a given production rate. This increase in pressure drop may force an other-wise stable cone into a well. The critical production rate, well known in the literature, is the rate above which the flowing pressure gradient at the well causes water (or gas) to cone into the well. It is, therefore, the maximum rate of oil production without concurrent production of the displacing phase by coning. At the critical rate, a built-up cone is stable but is at a position of incipient breakthrough. Numerous papers have been published on critical rates. Some of the better known of these include the work ofMuskat and Wyckoff, who first dealt with the coning problem;Chancy, et al, who developed expressions similar to those of Muskat but who presented results in a convenient-to-use graphical form (the "Sun" method); andMeyer and Garder, whose analysis is based on radial-flow formulas. One assumption in critical production rate analyses is that the cone has built-up to just before its breakthrough into the well. But, these analyses reveal nothing directly about the time it takes for the cone to build up to this incipient breakthrough position. Thus, water-free oil can be produced from a well for prolonged periods at rates above the critical rate before the well reaches the condition to which the critical rate applies. The published literature contains little on the rate of growth of a cone. Experimentally, Meyer and Searcy studied the rate of rise of a cone in a Hele-Shaw model. Additional related work on water breakthrough and produced water-oil ratios in water driven reservoirs was reported by Muskat, Hutchinson and Kemp, Henley, et al, and Stevens, et al. Theoretically. the basic coning equations for a water-oil system can be developed by applying the conservation of mass to each of the phases, relating flow velocities with pressure by Darcy's law, and relating pressures across water-oil interfaces by capillary pressure. With the usual boundaries at the well and reservoir limits, the solution of the resulting equations for the time behavior of a water-oil interface constitutes a free-surface, boundary-value problem. JPT P. 594ˆ
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