No abstract

HighlightThe rice d1 Gα mutant with dwarf and erect leaves exhibits a lower leaf temperature and reduced susceptibility to water stress.

We studied physiological mechanisms of photoavoidance and photoprotection of a dwarf rice mutant with erect leaves, d1, in which the RGA1 gene, which encodes the Gα subunit of the heterotrimeric G protein, is non-functional. Leaves of d1 exhibit lower leaf temperature and higher photochemical reflectance index relative to wild type (WT), indicative of increased photoavoidance and more efficient light harvesting. RNA sequencing analysis of flag leaves revealed that messenger RNA levels of genes encoding heat shock proteins, enzymes associated with chlorophyll breakdown, and ROS scavengers were down-regulated in d1. By contrast, genes encoding proteins associated with light harvesting, Photosystem II, cyclic electron transport, Photosystem I, and chlorophyll biosynthesis were up-regulated in d1. Consistent with these observations, when WT and d1 plants were experimentally subjected to the same light intensity, d1 plants exhibited a greater capacity to dissipate excess irradiance (increased nonphotochemical quenching) relative to WT. The increased capacity in d1 for both photoavoidance and photoprotection reduced sustained photoinhibitory damage, as revealed by a higher F /F . We therefore propose RGA1 as a regulator of photoavoidance and photoprotection mechanisms in rice and highlight the prospect of exploiting modulation of heterotrimeric G protein signalling to increase these characteristics and improve the yield of cereals in the event of abiotic stress.

Semidwarf stature is a valuable agronomic trait in grain crops that reduces lodging and increases harvest index. A fundamental advance during the 1960s Green Revolution was the introduction of semidwarf cultivars of rice and wheat. Essentially, all semidwarf varieties of rice under cultivation today owe their diminished stature to a specific null mutation in the gibberellic acid (GA) biosynthesis gene, SD1. However, it is now well-established that, in addition to GAs, brassinosteroids and strigolactones also control plant height. In this review, we describe the synthesis and signaling pathways of these three hormones as understood in rice and discuss the mutants and transgenics in these pathways that confer semidwarfism and other valuable architectural traits. We propose that such genes offer underexploited opportunities for broadening the genetic basis and germplasm in semidwarf rice breeding.

Invading exotics typically face new competitors and an absence of specialized herbivores in their new ranges. Biological control attempts to reunite invasive weeds with coevolved herbivores and restoration can reduce the return of invaders by maximizing competition from native species. The integration of both approaches is seldom examined in detail, although the two should complement each other. We investigated the potential to suppress an important invasive plant, Canada thistle (Cirsium arvense [L.] Scop.), by integrating biological control and competition from two native grasses frequently used in rangeland restoration. We evaluated the impacts of Ceutorhynchus litura F. (Coleoptera: Curculionidae), a weevil used for Canada thistle biological control, alone and in combination with either needle and thread grass (Hesperostipa comata [Trin. & Rupr.] Barkworth) or alkali sacaton (Sporobolus airoides [Torr.] Torr.) in greenhouse competitive plantings. Weevil herbivory reduced root, but not shoot, biomass of Canada thistle. Competition from H. comata did not reduce biomass of thistles, but combinations of the weevil and H. comata greatly reduced thistle root biomass. S. airoides suppressed Canada thistle root biomass independent of weevils. Weevils had a positive indirect effect on the cool-season grass H. comata, presumably by reducing the competitive ability of thistles, but had no effect on biomass of the warm-season grass, S. airoides. Benefits of weevil presence as an augmentation of grass competition appear to depend on appropriate timing, and weevils provided the most benefit to the coolseason competitor. Our results suggest that restoration efforts can be complemented with insect biocontrol agents, although the timing of impact will depend on the particular weed species, grass competitors, and biocontrol insect agents involved. Resumen Las especies exóticas invasoras en general enfrentan nuevos competidores y una ausencia de herbívoros especializados en sus nuevos rangos. El control biológico intenta reunir las malas hierbas con herbívoros co-evolucionados y la restauración puede reducir el retorno de invasores por lograr maximizar la competencia de especies nativas. La integración de ambos métodos es rara vez examinado en detalle, aunque los dos se deberían complementar entre sí. Nosotros investigamos el potencial para suprimir una importante planta invasora, Cardo triguero de Canadá (Cirsium arvense [L.] Scop.) mediante la integración del control biológico y la competencia de dos gramas nativas utilizadas frecuentemente en la restauración de pastizales. Nosotros evaluamos los impactos del Ceutorhynchus litura F. (Coleoptera: Curculionidae), un gorgojo utilizado para el control biológico del cardo triguero de Canadá, solo y en combinación con cualquiera de la ''needle and thread grass'' (Hesperostipa comata [Trin. & Rupr.] Barkworth) ó ''alkali sacaton'' (Sporobolus airoides [Torr.] Torr.) en plantaciones competitivas de invernadero. La herbivoría del gorgojo redujo la raíz pero no el crecimiento de biomas...

Native plant individuals often persist within communities dominated by exotics but the influence of this exposure on native populations is poorly understood. Selection for traits contributing to competitive ability may lead to native plant populations that are more tolerant of the presence of exotic invaders. In this way, long-term coexistence with an exotic may confer competitive advantages to remnant (experienced) native populations and be potentially beneficial to restoration. In past studies we have documented genetic differentiation within native grass populations exposed to the exotic invader Russian knapweed (Acroptilon repens). Here, we examine populations of a cool-season grass, needle-and-thread (Hesperostipa comata [Trin. & Rupr.]) and a warm season, alkali sacaton (Sporobolus airoides [Torr.]) collected from Russian knapweed-invaded sites and adjacent noninvaded sites to assess their relative competitive ability against a novel exotic neighbor, Canada thistle (Cirsium arvense). Experienced S. airoides (from within A. repens invasions) appear to better tolerate (accumulate biomass, leaf nitrogen content, and to initiate new tillers) the presence of a novel competitor (C. arvense).Experienced and inexperienced H. comata genets differ in their response to the presence of C. arvense. Relative neighbor effects of native grasses on C. arvense were generally greater from experienced grasses. The ability to compete with novel neighbors may be driven by general competitive traits rather than species-specific coevolutionary trajectories. Irrespective of competitive mechanisms, the conservation of native species populations within weed invasions may provide an important restoration tool by retaining unique components of native gene pools selected by competitive interactions with exotics.

We review the relevance and use of stable isotopes for the study of plant community succession. Stable isotope measurements provide information on the origin of resources acquired by plants, the processes governing resource uptake and transformation, and the physiological and environmental conditions of plant growth. When combined with measurements of the stable isotope ratio values of soil microbial biomass, soil organic matter and plant litter, isotope measurements of plants can indicate effects of successional changes on ecosystem processes. However, their application to questions of plant succession and ecosystem change is limited by the degree to which the underlying assumptions are met in each study, and complementary measures may be required, depending upon the question of interest. First, we discuss the changes that occur in the stable isotope composition of plants and ecosystems with ontogeny and species replacements, as well as their potential evolutionary significance. Second, we discuss the imprints of plant competition and facilitation on leaf and wood tissue, as well as how stable isotopes can provide novel insights on the mechanisms underlying plant interactions. Finally, we discuss the capacity for stable isotope measurements to serve as a proxy record for past disturbances such as fire, logging and cyclones.

Background Genome-wide association studies (GWAS) aim to correlate phenotypic changes with genotypic variation. Upon transcription, single nucleotide variants (SNVs) may alter mRNA structure, with potential impacts on transcript stability, macromolecular interactions, and translation. However, plant genomes have not been assessed for the presence of these structure-altering polymorphisms or “riboSNitches.” Results We experimentally demonstrate the presence of riboSNitches in transcripts of two Arabidopsis genes, ZINC RIBBON 3 (ZR3) and COTTON GOLGI-RELATED 3 (CGR3), which are associated with continentality and temperature variation in the natural environment. These riboSNitches are also associated with differences in the abundance of their respective transcripts, implying a role in regulating the gene's expression in adaptation to local climate conditions. We then computationally predict riboSNitches transcriptome-wide in mRNAs of 879 naturally inbred Arabidopsis accessions. We characterize correlations between SNPs/riboSNitches in these accessions and 434 climate descriptors of their local environments, suggesting a role of these variants in local adaptation. We integrate this information in CLIMtools V2.0 and provide a new web resource, T-CLIM, that reveals associations between transcript abundance variation and local environmental variation. Conclusion We functionally validate two plant riboSNitches and, for the first time, demonstrate riboSNitch conditionality dependent on temperature, coining the term “conditional riboSNitch.” We provide the first pan-genome-wide prediction of riboSNitches in plants. We expand our previous CLIMtools web resource with riboSNitch information and with 1868 additional Arabidopsis genomes and 269 additional climate conditions, which will greatly facilitate in silico studies of natural genetic variation, its phenotypic consequences, and its role in local adaptation.