Recent improvements in biomedical image analysis using deep learning based neural networks could be exploited to enhance the performance of Computer Aided Diagnosis (CAD) systems. Considering the importance of breast cancer worldwide and the promising results reported by deep learning based methods in breast imaging, an overview of the recent state-of-the-art deep learning based CAD systems developed for mammography and breast histopathology images is presented. In this study, the relationship between mammography and histopathology phenotypes is described, which takes biological aspects into account. We propose a computer based breast cancer modelling approach: the Mammography-Histology-Phenotype-Linking-Model, which develops a mapping of features/phenotypes between mammographic abnormalities and their histopathological representation. Challenges are discussed along with the potential contribution of such a system to clinical decision making and treatment management.

Breast and pectoral muscle segmentation is an essential pre-processing step for the subsequent processes in computer aided diagnosis (CAD) systems. Estimating the breast and pectoral boundaries is a difficult task especially in mammograms due to artifacts, homogeneity between the pectoral and breast regions, and low contrast along the skin-air boundary. In this paper, a breast boundary and pectoral muscle segmentation method in mammograms is proposed. For breast boundary estimation, we determine the initial breast boundary via thresholding and employ Active Contour Models without edges to search for the actual boundary. A post-processing technique is proposed to correct the overestimated boundary caused by artifacts. The pectoral muscle boundary is estimated using Canny edge detection and a pre-processing technique is proposed to remove noisy edges. Subsequently, we identify five edge features to find the edge that has the highest probability of being the initial pectoral contour and search for the actual boundary via contour growing. The segmentation results for the proposed method are compared with manual segmentations using 322, 208 and 100mammograms from the Mammographic Image Analysis Society (MIAS), INBreast and Breast Cancer Digital Repository (BCDR) databases, respectively. Experimental results show that the breast boundary and pectoral muscle estimation methods achieved dice similarity coefficients of 98.8% and 97.8% (MIAS), 98.9% and 89.6% (INBreast) and 99.2% and 91.9% (BCDR), respectively.

Breast cancer is one of the most common cancer risks to women in the world. Amongst multiple breast imaging modalities, mammography has been widely used in breast cancer diagnosis and screening. Quantitative analyses including breast boundary segmentation and calcification localization are essential steps in a Computer Aided Diagnosis system based on mammography analysis. Due to uneven signal spatial distributions of pectoral muscle and glandular tissue, plus various artifacts in imaging, it is still challenging to automatically analyze mammogram images with high precision. In this paper, a fully automated pipeline of mammogram image processing is proposed, which estimates skin-air boundary using gradient weight map, detects pectoral-breast boundary by unsupervised pixel-wise labeling with no pre-labeled areas needed, and finally detects calcifications inside the breast region with a novel texture filter. Experimental results on Mammogram Image Analysis Society database show that the proposed method performs breast boundary segmentation and calcification detection with high accuracy of 97.08% and 96.15% respectively, and slightly higher accuracies are achieved on Full-Field Digital Mammography image datasets. Calculation of Jaccard and Dice indexes between segmented breast regions and the ground truths are also included as comprehensive similarity evaluations, which could provide valuable support for mammogram analysis in clinic.

This paper presents a method for automatic breast pectoral muscle segmentation in mediolateral oblique mammograms using a Convolutional Neural Network (CNN) inspired by the Holistically-nested Edge Detection (HED) network. Most of the existing methods in the literature are based on handcrafted models such as straight-line, curve-based techniques or a combination of both. Unfortunately, such models are insufficient when dealing with complex shape variations of the pectoral muscle boundary and when the boundary is unclear due to overlapping breast tissue. To compensate for these issues, we propose a neural network framework that incorporates multi-scale and multi-level learning, capable of learning complex hierarchical features to resolve spatial ambiguity in estimating the pectoral muscle boundary. For this purpose, we modified the HED network architecture to specifically find 'contour-like' objects in mammograms. The proposed framework produced

This paper presents an extension of work from our previous study by investigating the use of Local Quinary Patterns (LQP) for breast density classification in mammograms on various neighbourhood topologies. The LQP operators are used to capture the texture characteristics of the fibro-glandular disk region (FGD roi ) instead of the whole breast area as the majority of current studies have done. We take a multiresolution and multi-orientation approach, investigate the effects of various neighbourhood topologies and select dominant patterns to maximise texture information. Subsequently, the Support Vector Machine classifier is used to perform the classification, and a stratified ten-fold cross-validation scheme is employed to evaluate the performance of the method. The proposed method produced competitive results up to 86.13% and 82.02% accuracy based on 322 and 206 mammograms taken from the Mammographic Image Analysis Society (MIAS) and InBreast datasets, which is comparable with the state-of-the-art in the literature.

In this paper we propose a prostate cancer computer-aided diagnosis (CAD) system and suggest a set of discriminant texture descriptors extracted from T2-weighted MRI data which can be used as a good basis for a multimodality system. For this purpose, 215 texture descriptors were extracted and eleven different classifiers were employed to achieve the best possible results. The proposed method was tested based on 418 T2-weighted MR images taken from 45 patients and evaluated using 9-fold cross validation with five patients in each fold. The results demonstrated comparable results to existing CAD systems using multimodality MRI. We achieved an area under the receiver operating curve (A z ) values equal to [Formula: see text], [Formula: see text], [Formula: see text] and [Formula: see text] for Bayesian networks, ADTree, random forest and multilayer perceptron classifiers, respectively, while a meta-voting classifier using average probability as a combination rule achieved [Formula: see text].

The paper presents quantitative results of a preliminary study undertaken as part of Decision Support and Information Management System for Breast Cancer (DESIREE). DESIREE is a European-funded project to improve the management of primary breast cancer through image-based, guidelinebased, experience-based, and case-based information systems. In this study we explore the use of ensemble deep learning for breast mass classification in mammograms. The proposed method is based on AlexNet with some modifications in order to adapt it to our classification problem. Subsequently, model selection is performed to select the best three results based on the highest validation accuracies during the validation phase. Finally, the prediction is based on the average probability of the models. Experimental evaluation shows that accuracy from individual models ranges between 75% and 77%, but combining the best models (ensemble networks) results in over 80% classification accuracy and aura under the curve.

This paper describes the development of a new texture based segmentation algorithm which uses a set of features extracted from Grey-Level Co-occurrence Matrices. The proposed method segments different textures based on noise reduced features which are effective texture descriptor. Each of the features is processed including normalisation and noise removal. Principal Component Analysis is used to reduce the dimensionality of the resulting feature space. Gaussian Mixture Modelling is used for the subsequent segmentation and false positive regions are removed using morphology. The evaluation includes a wide range of textures (more than 80 Brodatz textures) and in comparison (both qualitative and quantitative) with state of the art techniques very good segmentation results have been obtained.