Dimethylsulfoniopropionate (DMSP) and its catabolite dimethyl sulfide (DMS) are key marine nutrients 1,2 , with roles in global sulfur cycling 2 , atmospheric chemistry 3 , signalling 4,5 and, potentially, climate regulation 6,7. DMSP production was previously thought to be an oxic and photic process, mainly confined to the surface oceans. 2 However, here we show that DMSP concentrations and DMSP/DMS synthesis rates were higher in surface marine sediment from e.g., saltmarsh ponds, estuaries and the deep ocean than in the overlying seawater. A quarter of bacterial strains isolated from saltmarsh sediment produced DMSP (up to 73 mM), and previously unknown DMSPproducers were identified. Most DMSP-producing isolates contained dsyB 8 , but some alphaproteobacteria, gammaproteobacteria and actinobacteria utilised a methionine methylation pathway independent of DsyB, previously only associated with higher plants. These bacteria contained a methionine methyltransferase 'mmtN' gene-a marker for bacterial DMSP synthesis via this pathway. DMSP-producing bacteria and their dsyB and/or mmtN transcripts were present in all tested seawater samples and Tara Oceans bacterioplankton datasets, but were far more abundant in marine surface sediment. Approximately 10 8 bacteria per gram of surface marine sediment are predicted to produce DMSP, and their contribution to this process should be included in future models of global DMSP production. We propose that coastal and marine sediments, which cover a large part of the Earth's surface, are environments with high DMSP and DMS productivity, and that bacteria are important producers within them. Approximately eight billion tonnes of DMSP is produced by phytoplankton in the Earth's surface oceans annually 9. However, surface sediment from saltmarsh ponds, an estuary and the deep ocean (with high pressures and no light) contained DMSP levels (5-128 nmol DMSP g-1) that were up to ~three orders of magnitude higher than the overlying seawater (0.01-0.70 nmol DMSP ml-1) (Fig. 1a-b, Supplementary Tables 1a and 2), a phenomenon also observed in 10,11. DMSP concentration decreased with depth, being much lower in anoxic sediment, but even in deeper sediments the concentration was approximately an order of magnitude higher than in the overlying seawater (Supplementary Table 1a). This study focused on DMSP synthesis in coastal surface sediments, where DMSP concentrations were highest. The
Abstract. The climate in the Arctic is changing faster than anywhere else on earth. Poorly understood feedback processes relating to Arctic clouds and aerosol-cloud interactions contribute to a poor understanding of the present changes in the Arctic climate system, and also to a large spread in projections of future climate in the Arctic. The problem is exacerbated by the paucity of research-quality observations in the central Arctic. Improved formulations in climate models require such observations, which can only come from measurements in situ in this difficult-to-reach region with logistically demanding environmental conditions.The Arctic Summer Cloud Ocean Study (ASCOS) was the most extensive central Arctic Ocean expedition with an atmospheric focus during the International Polar Year (IPY) [2007][2008]. ASCOS focused on the study of the formation and life cycle of low-level Arctic clouds. ASCOS departed from Longyearbyen on Svalbard on 2 August and returned on 9 September 2008. In transit into and out of the pack ice, four short research stations were undertaken in the Fram Strait: two in open water and two in the marginal ice zone. After traversing the pack ice northward, an ice camp was set up on 12 August at 87 • 21 N, 01 • 29 W and remained in operation through 1 September, drifting with the ice. During this time, extensive measurements were taken of atmospheric gas and particle chemistry and physics, mesoscale and boundarylayer meteorology, marine biology and chemistry, and upper ocean physics.ASCOS provides a unique interdisciplinary data set for development and testing of new hypotheses on cloud processes, their interactions with the sea ice and ocean and associated physical, chemical, and biological processes and interactions. For example, the first-ever quantitative observation of bubbles in Arctic leads, combined with the unique discovery of marine organic material, polymer gels with an origin in the ocean, inside cloud droplets suggests the possibility of primary marine organically derived cloud condensation nuclei in Arctic stratocumulus clouds. Direct observations of surface fluxes of aerosols could, however, not explain observed variability in aerosol concentrations, and the balance between local and remote aerosols sources remains open. Lack of cloud condensation nuclei (CCN) was at times a controlling factor in low-level cloud formation, and hence for the impact of clouds on the surface energy budget. AS-COS provided detailed measurements of the surface energy balance from late summer melt into the initial autumn freezeup, and documented the effects of clouds and storms on the surface energy balance during this transition. In addition to such process-level studies, the unique, independent ASCOS data set can and is being used for validation of satellite retrievals, operational models, and reanalysis data sets.
Three recently isolated extremely acidophilic archaeal strains have been shown to be phylogenetically similar to Ferroplasma acidiphilum Y T by 16S rRNA gene sequencing. All four Ferroplasma isolates were capable of growing chemoorganotrophically on yeast extract or a range of sugars and chemomixotrophically on ferrous iron and yeast extract or sugars, and isolate "Ferroplasma acidarmanus" Fer1 T required much higher levels of organic carbon. All four isolates were facultative anaerobes, coupling chemoorganotrophic growth on yeast extract to the reduction of ferric iron. The temperature optima for the four isolates were between 35 and 42°C and the pH optima were 1.0 to 1.7, and "F. acidarmanus" Fer1 T was capable of growing at pH 0. The optimum yeast extract concentration for "F. acidarmanus" Fer1 T was higher than that for the other three isolates. Phenotypic results suggested that isolate "F. acidarmanus" Fer1 T is of a different species than the other three strains, and 16S rRNA sequence data, DNA-DNA similarity values, and two-dimensional polyacrylamide gel electrophoresis protein profiles clearly showed that strains DR1, MT17, and Y
[1] Simultaneous measurements of NH 3 in the atmosphere and NH 4 + in the ocean are presented from fieldwork spanning 10 years and 110 degrees of latitude, including the first such simultaneous measurements in the remote marine environment at >55°N. At high latitudes, fluxes were almost exclusively from air to sea, in contradiction with previous lower-latitude studies, which have suggested that the open oceans are predominantly sources of ammonia to the atmosphere. Sensitivity analysis demonstrates that the direction and magnitude of the ocean-atmosphere NH 3 exchange is highly dependent on water temperature. This temperature effect is sufficiently strong to outweigh the effects of variability in concentrations in seawater and atmosphere in many parts of the (open) ocean. This is highlighted in data from the Atlantic oligotrophic gyres, where fluxes were found to be predominantly out of the ocean despite extremely low dissolved ammonium concentrations in surface waters.
The climate in the Arctic is changing faster than anywhere else on Earth. Poorly understood feedback processes relating to Arctic clouds and aerosol-cloud interactions contribute to a poor understanding of the present changes in the Arctic climate system, and also to a large spread in projections of future climate in the Arctic. The problem is exacerbated by the paucity of research-quality observations in the central Arctic. Improved formulations in climate models require such observations, which can only come from measurements in-situ in this difficult to reach region with logistically demanding environmental conditions.
The Arctic Summer Cloud-Ocean Study (ASCOS) was the most extensive central Arctic Ocean expedition with an atmospheric focus during the International Polar Year (IPY) 2007–2008. ASCOS focused on the study of the formation and life cycle of low-level Arctic clouds. ASCOS departed from Longyearbyen on Svalbard on 2 August and returned on 9 September 2008. In transit into and out of the pack ice, four short research stations were undertaken in the Fram Strait; two in open water and two in the marginal ice zone. After traversing the pack-ice northward an ice camp was set up on 12 August at 87°21' N 01°29' W and remained in operation through 1 September, drifting with the ice. During this time extensive measurements were taken of atmospheric gas and particle chemistry and physics, mesoscale and boundary-layer meteorology, marine biology and chemistry, and upper ocean physics.
ASCOS provides a unique interdisciplinary data set for development and testing of new hypotheses on cloud processes, their interactions with the sea ice and ocean and associated physical, chemical, and biological processes and interactions. For example, the first ever quantitative observation of bubbles in Arctic leads, combined with the unique discovery of marine organic material, polymer gels with an origin in the ocean, inside cloud droplets suggest the possibility of primary marine organically derived cloud condensation nuclei in Arctic stratocumulus clouds. Direct observations of surface fluxes of aerosols could, however, not explain observed variability in aerosol concentrations and the balance between local and remote aerosols sources remains open. Lack of CCN was at times a controlling factor in low-level cloud formation, and hence for the impact of clouds on the surface energy budget. ASCOS provided detailed measurements of the surface energy balance from late summer melt into the initial autumn freeze-up, and documented the effects of clouds and storms on the surface energy balance during this transition. In addition to such process-level studies, the unique, independent ASCOS data set can and is being used for validation of satellite retrievals, operational models, and reanalysis data sets
Abstract. Aerosol loading in the marine environment is investigated using aerosol composition measurements from several research ship campaigns (ICEALOT, MAP, RHaMBLe, VOCALS and OOMPH), observations of total AOD column from satellite (MODIS) and ship-based instruments (Maritime Aerosol Network, MAN), and a global chemical transport model (GEOS-Chem). This work represents the most comprehensive evaluation of oceanic OM emission inventories to date, by employing aerosol composition measurements obtained from campaigns with wide spatial and temporal coverage. The model underestimates AOD over the remote ocean on average by 0.02 (21 %), compared to satellite observations, but provides an unbiased simulation of ground-based Maritime Aerosol Network (MAN) observations. Comparison with cruise data demonstrates that the GEOS-Chem simulation of marine sulfate, with the mean observed values ranging between 0.22 µg m −3 and 1.34 µg m −3 , is generally unbiased, however surface organic matter (OM) concentrations, with the mean observed concentrations between 0.07 µg m −3 and 0.77 µg m −3 , are underestimated by a factor of 2-5 for the standard model run. Addition of a sub-micron marine OM source of approximately 9 TgC yr −1 brings the model into agreement with the ship-based measurements, however this additional OM source does not exCorrespondence to: K. Lapina (klapina@atmos.colostate.edu) plain the model underestimate of marine AOD. The model underestimate of marine AOD is therefore likely the result of a combination of satellite retrieval bias and a missing marine aerosol source (which exhibits a different spatial pattern than existing aerosol in the model).
Abstract. In stratified shelf seas, oxygen depletion beneath the thermocline is a result of a greater rate of biological oxygen demand than the rate of supply of oxygenated water. Suitably equipped gliders are uniquely placed to observe both the supply through the thermocline and the consumption of oxygen in the bottom layers. A Seaglider was deployed in the shallow ( ≈ 100 m) stratified North Sea in a region of known low oxygen during August 2011 to investigate the processes regulating supply and consumption of dissolved oxygen below the pycnocline. The first deployment of such a device in this area, it provided extremely high-resolution observations, 316 profiles (every 16 min, vertical resolution of 1 m) of conductivity, temperature, and depth (CTD), dissolved oxygen concentrations, backscatter, and fluorescence during a 3-day deployment.The high temporal resolution observations revealed occasional small-scale events (< 200 m or 6 h) that supply oxygenated water to the bottom layer at a rate of 2 ± 1 µmol dm −3 day −1 . Benthic and pelagic oxygen sinks, quantified through glider observations and past studies, indicate more gradual background consumption rates of 2.5 ± 1 µmol dm −3 day −1 . This budget revealed that the balance of oxygen supply and demand is in agreement with previous studies of the North Sea. However, the glider data show a net oxygen consumption rate of 2.8 ± 0.3 µmol dm −3 day −1 , indicating a localized or shortlived (< 200 m or 6 h) increase in oxygen consumption rates. This high rate of oxygen consumption is indicative of an unidentified oxygen sink. We propose that this elevated oxygen consumption is linked to localized depocentres and rapid remineralization of resuspended organic matter.The glider proved to be an excellent tool for monitoring shelf sea processes despite challenges to glider flight posed by high tidal velocities, shallow bathymetry, and very strong density gradients. The direct observation of these processes allows more up to date rates to be used in the development of ecosystem models.
Aerosol loading in the marine environment is investigated using aerosol composition measurements from several research ship campaigns (ICEALOT, MAP, RHaMBLe, VOCALS and OOMPH), observations of total AOD column from satellite (MODIS) and ship-based instruments (Maritime Aerosol Network, MAN), and a global chemical transport model (GEOS-Chem). This work represents the most comprehensive evaluation of oceanic OM emission inventories to date, by employing aerosol composition measurements obtained from campaigns with wide spatial and temporal coverage. The model underestimates AOD over the remote oceanic regions on average by 13–30%, compared to satellite and MAN observations. Comparison with cruise data demonstrates that the GEOS-Chem simulation of marine sulfate, with the mean observed values ranging between 0.22 μg m<sup>−3</sup> and 1.34 μg m<sup>−3</sup>, is generally unbiased, however surface organic matter (OM) concentrations, with the mean observed concentrations between 0.07 μg m<sup>−3</sup> and 0.77 μg m<sup>−3</sup>, are largely underestimated. We find that ship-based measurements are consistent with a sub-micron marine OM source of 9 TgC yr<sup>−1</sup> or less, however this additional OM source does not explain the model underestimate of marine AOD
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