Objective This article describes the first digital clinical information system tailored to support the operational needs of a forensic unit in Greece and to maintain its archives. Method The development of our system was initiated towards the end of 2018, as a close collaboration between the Medical School of the University of Crete and the Forensic Medicine Unit of the University Hospital of Heraklion, Crete, where forensic pathologists assumed active roles during the specification and testing of the system. Results The final prototype of the system was able to manage the life cycle of any forensic case by allowing users to create new records, assign them to forensic pathologists, upload reports, multimedia and any required files; mark the end of processing, issue certificates or appropriate legal documents, produce reports and generate statistics. For the first 4 years of digitised data (2017–2021), the system recorded 2936 forensic examinations categorised as 106 crime scene investigations, 259 external examinations, 912 autopsies, 102 post-mortem CT examinations, 804 histological examinations, 116 clinical examinations, 12 anthropological examinations and 625 embalmings. Conclusion This research represents the first systematic effort to record forensic cases through a digital clinical information system in Greece, and to demonstrate its effectiveness, daily usability and vast potential for data extraction and for future research.
Ethnopharmacology experts face several challenges when identifying and retrieving documents and resources related to their scientific focus. The volume of sources that need to be monitored, the variety of formats utilized, and the different quality of language use across sources present some of what we call “big data” challenges in the analysis of this data. This study aims to understand if and how experts can be supported effectively through intelligent tools in the task of ethnopharmacological literature research. To this end, we utilize a real case study of ethnopharmacology research aimed at the southern Balkans and the coastal zone of Asia Minor. Thus, we propose a methodology for more efficient research in ethnopharmacology. Our work follows an “expert–apprentice” paradigm in an automatic URL extraction process, through crawling, where the apprentice is a machine learning (ML) algorithm, utilizing a combination of active learning (AL) and reinforcement learning (RL), and the expert is the human researcher. ML-powered research improved the effectiveness and efficiency of the domain expert by 3.1 and 5.14 times, respectively, fetching a total number of 420 relevant ethnopharmacological documents in only 7 h versus an estimated 36 h of human-expert effort. Therefore, utilizing artificial intelligence (AI) tools to support the researcher can boost the efficiency and effectiveness of the identification and retrieval of appropriate documents.
A focused crawler aims at discovering as many web pages relevant to a target topic as possible, while avoiding irrelevant ones; i.e. maximizing the harvest rate. Reinforcement Learning (RL) has been utilized to optimize the crawling process, yet it deals with huge state and action spaces, which can constitute a serious challenge. In this paper, we propose TRES, an end-to-end RL-empowered framework for focused crawling. Unlike other approaches, we properly model a crawling environment as a Markov Decision Process, by representing the state as a subgraph of the Web and actions as its expansion edges. TRES adopts a keyword expansion strategy based on the cosine similarity of keyword embeddings. To learn a reward function, we propose a deep neural network, called Kw-BiLSTM, leveraging the discovered keywords. To reduce the time complexity of selecting a best action, we propose Tree-Frontier, a two-fold decision tree, which also speeds up training by discretizing the state and action spaces. Experimentally, we show that TRES outperforms state-of-the-art methods in terms of harvest rate by at least 58%, while it has competitive results in the domain maximization. Our implementation code can be found on https://github.com/ddaedalus/TRES.
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