Four novel 1,8-disubstituted naphthalene derivatives 4-7 that contain chalcogen atoms occupying the peri positions have been prepared and fully characterised by using X-ray crystallography, multinuclear NMR spectroscopy, IR spectroscopy and MS. Molecular distortion due to noncovalent substituent interactions was studied as a function of the bulk of the interacting chalcogen atoms and the size and nature of the alkyl group attached to them. X-ray data for 4-7 was compared to the series of known 1,8-bis(phenylchalcogeno)naphthalenes 1-3, which were themselves prepared from novel synthetic routes. A general increase in the E...E' distance was observed for molecules containing bulkier atoms at the peri positions. The decreased S...S distance from phenyl-1 and ethyl-4 analogues is ascribed to a weaker chalcogen lone pair-lone pair repulsion acting in the ethyl analogue due to the presence of two equatorial S(naphthyl) ring conformations. Two novel peri-substituted naphthalene sulfoxides of 1, Nap(O=SPh)(SPh) 8 and Nap(O=SPh)(2) 9, which contain different valence states of sulfur, were prepared and fully characterised by using X-ray crystallography and multinuclear NMR spectroscopy, IR spectroscopy and MS. Molecular structures were analysed by using naphthalene ring torsions, peri-atom displacement, splay angle magnitude, S...S interactions, aromatic ring orientations and quasi-linear O=S...S arrangements. The axial S(naphthyl) rings in 8 and 9 are unfavourable for S...S contacts due to stronger chalcogen lone pair-lone pair repulsion. Although quasi-linear O=S...S alignments suggest attractive interaction is conceivable, analysis of the B3LYP wavefunctions affords no evidence for direct bonding interactions between the S atoms.

The reaction of 5-diphenoxyphosphanyl-6-diisopropylphosphinoacenaphthene 12 with chlorotrimethylsilane unexpectedly gave a phosphonium-phosphine compound 13, containing the structural motif of four phosphorus atoms connected in a chain. To explain the mechanism of this complex transformation, a proposed intermediate 5-dichlorophosphino-6-diisopropylphosphinoacenaphthene 14 was synthesized by an alternative method. The two (formally) phosphine environments in 14 form an intramolecular donor-acceptor (phosphonium-phosphoranide) complex, stable at room temperature in the solid state and as a solution in certain solvents. A (31)P NMR mechanistic study showed that, despite the presence of a rigid acenaphthene backbone, 14 is unstable in the presence of nucleophiles and disproportionates into 13 and other phosphorus containing products. Both 13 and 14 have been crystallographically characterized.

The recent discovery of acireductone dioxygenase (ARD), a metalloenzyme containing a mononuclear octahedral Ni(II) center, necessitates the development of model systems for evaluating the role of the metal center in substrate oxidation chemistry. In this work, three Ni(II) complexes of an aryl-appended tris((2-pyridyl)methyl)amine ligand (6-Ph(2)TPA, N,N-bis((6-phenyl-2-pyridyl)methyl)-N-((2-pyridyl)methyl)amine), [(6-Ph(2)TPA)Ni(CH(3)CN)(CH(3)OH)](ClO(4))(2) (1), [(6-Ph(2)TPA)Ni(ONHC(O)CH(3))]ClO(4) (3), and [(6-Ph(2)TPA)Ni-Cl(CH(3)CN)]ClO(4) (4), and one Ni(II) complex of tris((2-pyridyl)methyl)amine, [(TPA)Ni(CH(3)CN)(H(2)O)](ClO(4))(2) (2), have been characterized in acetonitrile solution using conductance methods and NMR spectroscopy. In acetonitrile solution, 1-4 have monomeric cations that exhibit isotropically shifted (1)H NMR resonances. Full assignment of these resonances was achieved using one- and two-dimensional (1)H NMR techniques and (2)H NMR of analogues having deuteration of the supporting chelate ligand. COSY cross peaks were observed for pyridyl protons of the 6-Ph(2)TPA ligand in 1 and 3. This study lays the groundwork for using NMR methods to examine chemical reactions of 1 and 2 with model substrates of relevance to ARD.

Abstract:The first fully automated small-molecule robotic X-ray diffractometer is described. After demonstrating the utility of the instrument using multiple samples of ammonium bitartrate we investigated the conformational chirality of diphenyl dichalcogenide (E2Ph2, where E = S, Se, or Te). Structural and computational studies suggest that the two enantiomers are energetically indistinguishable. Therefore, it was unsurprising that we found (in 35 suitable data collections) the proportion 0.51:0.49 of M-S2Ph2 to P-S2Ph2 in the bulk sample. Interestingly, after 65 data collections of Te2Ph2, (46 provided suitable data sets), we found the proportion 0.72 ± 0.13 of M-Te2Ph2, Suggesting there could be a statistically significant preference for the M-enantiomer in the sample examined here. We found that Se2Ph2 underwent homochiral crystallization with all 24 crystals being M. Our experiments may represent a salutary lesson in statistical analysis.