Plants harbour in and at their roots bacterial microbiomes that contribute to their health and fitness. The microbiome composition is controlled by the environment and plant genotype. Previously, it was shown that the plant genotype-dependent dissimilarity of root microbiome composition of different species becomes smaller under drought stress. However, it remains unknown whether this reduced plant genotype-dependent effect is a specific response to drought stress or a more generic response to abiotic stress. To test this, we studied the effect of salt stress on two distinct barley (Hordeum vulgare L.) genotypes; the reference cultivar Golden Promise and the Algerian landrace AB. As inoculum, we used soil from a salinized and degraded farmland on which barley was cultivated. Controlled laboratory experiments showed that plants inoculated with this soil display growth stimulation under high salt stress (200mM) in a plant genotype-independent manner, whereas the landrace AB also showed significant growth stimulation at low salt concentrations. Subsequent analysis of the root microbiomes revealed a reduced dissimilarity of the bacterial communities of the two barley genotypes in response to high salt, especially in the endophytic compartment. High salt level did not reduce α-diversity (richness) in the endophytic compartment of both plant genotypes, but associates with an increased number of shared strains that respond positively to high salt. Among these, Pseudomonas species were most abundant. These findings suggest that the plant genotype-dependent microbiome composition is altered generically by abiotic stress.
La présente étude porte sur la nature des rhizobia associés aux légumineuses du genre Hippocrepis L. qui compte une dizaine d’espèces en Algérie et pour laquelle très peu de travaux ont été jusqu’ici consacrés. Les résultats de nos investigations qui ont portés sur 26 plants représentant 8 espèces de ce genre et provenant de 17 localités du nord et du sud du pays révèlent que tous les plants étaient nodulés et fixateurs d’azote, ce qui indique que les 8 espèces identifiées sont capables d’établir une symbiose efficiente avec les rhizobia présents dans les sols qui les supportent. Le séquençage du gène de l’ARN 16S des 26 souches de rhizobia isolées et authentifiées par des tests de nodulation au laboratoire, permet de les assigner à 16 espèces de rhizobia réparties sur 5 genres : Ensifer, Mesorhizobium, Bradyrhizobium, Rhizobium et Neorhizobium avec une prédominance des représentants des genres Ensifer et Mesorhizobium. Les résultats de cette étude qui est la première dédiée spécifiquement au genre Hippocrepis indiquent que la symbiose à rhizobia et la capacité d’utiliser, par ce biais, l’azote atmosphérique sont communes chez les représentants de ce genre en Algérie, ils révèlent aussi la grande diversité des rhizobia qui sont associés à ce genre. Abstract: The present study focuses on the nature of the rhizobia associated with legumes of the genus Hippocrepis L. which counts about ten species in Algeria and for which very little work has been performed so far. The results of our investigations, which focused on 26 plants representing 8 species of this genus and coming from 17 localities in the north and south of the country, show that all plants were nodulated and nitrogen-fixing, which indicates that the species identified are capable of establishing an efficient symbiosis with the rhizobia present in the soils that support them. The sequencing of the 16S RNA gene of the 26 strains of rhizobia isolated and authenticated by nodulation tests in the laboratory, allows their assignation to16 species of rhizobia spread over 5 genera: Ensifer, Mesorhizobium, Bradyrhizobium, Rhizobium and Neorhizobium with a predominance of representatives of the genera Ensifer and Mesorhizobium. The results of this study, which is the first dedicated to the genus Hippocrepis, show that the rhizobial symbiosis and its ability to use atmospheric nitrogen are common among representatives of the genus Hippocrepis in Algeria and reveal a great diversity of associated rhizobia
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