Plant Diseases and Pests are a major challenge in the agriculture sector. An accurate and a faster detection of diseases and pests in plants could help to develop an early treatment technique while substantially reducing economic losses. Recent developments in Deep Neural Networks have allowed researchers to drastically improve the accuracy of object detection and recognition systems. In this paper, we present a deep-learning-based approach to detect diseases and pests in tomato plants using images captured in-place by camera devices with various resolutions. Our goal is to find the more suitable deep-learning architecture for our task. Therefore, we consider three main families of detectors: Faster Region-based Convolutional Neural Network (Faster R-CNN), Region-based Fully Convolutional Network (R-FCN), and Single Shot Multibox Detector (SSD), which for the purpose of this work are called “deep learning meta-architectures”. We combine each of these meta-architectures with “deep feature extractors” such as VGG net and Residual Network (ResNet). We demonstrate the performance of deep meta-architectures and feature extractors, and additionally propose a method for local and global class annotation and data augmentation to increase the accuracy and reduce the number of false positives during training. We train and test our systems end-to-end on our large Tomato Diseases and Pests Dataset, which contains challenging images with diseases and pests, including several inter- and extra-class variations, such as infection status and location in the plant. Experimental results show that our proposed system can effectively recognize nine different types of diseases and pests, with the ability to deal with complex scenarios from a plant’s surrounding area.

A fundamental problem that confronts deep neural networks is the requirement of a large amount of data for a system to be efficient in complex applications. Promising results of this problem are made possible through the use of techniques such as data augmentation or transfer learning of pre-trained models in large datasets. But the problem still persists when the application provides limited or unbalanced data. In addition, the number of false positives resulting from training a deep model significantly cause a negative impact on the performance of the system. This study aims to address the problem of false positives and class unbalance by implementing a Refinement Filter Bank framework for Tomato Plant Diseases and Pests Recognition. The system consists of three main units: First, a Primary Diagnosis Unit (Bounding Box Generator) generates the bounding boxes that contain the location of the infected area and class. The promising boxes belonging to each class are then used as input to a Secondary Diagnosis Unit (CNN Filter Bank) for verification. In this second unit, misclassified samples are filtered through the training of independent CNN classifiers for each class. The result of the CNN Filter Bank is a decision of whether a target belongs to the category as it was detected (True) or not (False) otherwise. Finally, an integration unit combines the information from the primary and secondary units while keeping the True Positive samples and eliminating the False Positives that were misclassified in the first unit. By this implementation, the proposed approach is able to obtain a recognition rate of approximately 96%, which represents an improvement of 13% compared to our previous work in the complex task of tomato diseases and pest recognition. Furthermore, our system is able to deal with the false positives generated by the bounding box generator, and class unbalances that appear especially on datasets with limited data.

Acquisition of data in task-specific applications of machine learning like plant disease recognition is a costly endeavor owing to the requirements of professional human diligence and time constraints. In this paper, we present a simple pipeline that uses GANs in an unsupervised image translation environment to improve learning with respect to the data distribution in a plant disease dataset, reducing the partiality introduced by acute class imbalance and hence shifting the classification decision boundary towards better performance. The empirical analysis of our method is demonstrated on a limited dataset of 2789 tomato plant disease images, highly corrupted with an imbalance in the 9 disease categories. First, we extend the state of the art for the GAN-based image-to-image translation method by enhancing the perceptual quality of the generated images and preserving the semantics. We introduce AR-GAN, where in addition to the adversarial loss, our synthetic image generator optimizes on Activation Reconstruction loss (ARL) function that optimizes feature activations against the natural image. We present visually more compelling synthetic images in comparison to most prominent existing models and evaluate the performance of our GAN framework in terms of various datasets and metrics. Second, we evaluate the performance of a baseline convolutional neural network classifier for improved recognition using the resulting synthetic samples to augment our training set and compare it with the classical data augmentation scheme. We observe a significant improvement in classification accuracy (+5.2%) using generated synthetic samples as compared to (+0.8%) increase using classic augmentation in an equal class distribution environment.

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