The paper develops conceptual and methodological aspects on the innovative formation of entrepreneurial structures of the agro-industrial complex in the context of economic security by removing information uncertainty. Based on the study of the development trend of digital agriculture and the information security of business structures of the agro-industrial complex as the main component of economic security, it is established that there is a growing information uncertainty. The result of the study is the creation of a flowchart for the development of economic processes and changes in entropy associated with the pooling of resources into an infrastructural system of scientific and information support for business structures of the agro-industrial complex.
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