Association mapping (AM) is an alternative or complementary strategy to QTL mapping for describing associations between genotype and phenotype based on linkage disequilibrium (LD). Yellow pigment (YP), an important end-use quality trait in durum wheat (Triticum turgidum L. var. durum), was evaluated to determine the ability of AM to identify previously published QTL and to identify genomic regions for further genetic dissection. The YP concentration was determined for 93 durum wheat accessions sampled from a variety of geographic origins. Analysis of population structure using distance- and model-based estimates indicated the presence of five subpopulations. Using subpopulation assignments as covariates, significant (P < 0.05) marker-trait associations for YP were detected on all chromosomes of the durum genome. Using AM, genomic regions housing known YP QTL were confirmed, most notably the group 7 chromosomes. In addition, several markers on the group 1, 2, and 3 chromosomes were identified where QTL have yet to be reported. A phytoene synthase gene, Psy1-B1, a potential candidate gene for YP, was significantly associated with YP and was in strong LD with microsatellite markers on the distal end of 7BL. Our results demonstrated that AM complemented traditional QTL mapping techniques and identified novel QTL that should be the target of further genetic dissection.
Abstract-A total of 117 actinomycetes strains were isolated from the wasteland alkaline and garden soil samples of the Ghaziabad and screened for their anti-bacterial activity. They were evaluated for their inhibitory activities on four test microorganisms. Fifteen actinomycetes isolate which exhibited antimicrobial activity against at least two of the test organisms and were characterized by conventional methods. The cultural characteristics of isolates were also studies in different culture media. The results indicated that six isolates were highly active against Staphylococcus aureus strains. Seven isolates were highly active with an inhibition zone more than 20 mm in diameter. Most of the isolates inhibited growth of the Gram negative bacteria tested. All the antibiotic producing actinomycetes were isolated at different temperatures from non agricultural wasteland alkaline soil and compost rich garden soil. Fifteen isolates showed activity against bacteria in which most of them from wasteland alkaline soil where the less interference by human for agriculture or other purpose. These microorganisms may have capability to produce some of the most important medicines ever developed.
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