We consider approximation of a given positive definite matrix by nonnegative definite banded Toeplitz matrices. We show that the projection on linear space of Toeplitz matrices does not always preserve nonnegative definiteness. Therefore we characterize a convex cone of nonnegative definite banded Toeplitz matrices which depends on the matrix dimensions, and we show that the condition of positive definiteness given by Parter [{\em Numer. Math. 4}, 293--295, 1962] characterizes the asymptotic cone. In this paper we give methodology and numerical algorithm of the projection basing on the properties of a cone of nonnegative definite Toeplitz matrices. This problem can be applied in statistics, for example in the estimation of unknown covariance structures under the multi-level multivariate models, where positive definiteness is required. We conduct simulation studies to compare statistical properties of the estimators obtained by projection on the cone with a given matrix dimension and on the asymptotic cone.
Modern investigation techniques (e.g., metabolomic, proteomic, lipidomic, genomic, transcriptomic, phenotypic), allow to collect high-dimensional data, where the number of observations is smaller than the number of features. In such cases, for statistical analyzing, standard methods cannot be applied or lead to ill-conditioned estimators of the covariance matrix. To analyze the data, we need an estimator of the covariance matrix with good properties (e.g., positive definiteness), and therefore covariance matrix identification is crucial. The paper presents an approach to determine the block-structured estimator of the covariance matrix based on an example of metabolomic data on the drought resistance of barley. This method can be used in many fields of science, e.g., in agriculture, medicine, food and nutritional sciences, toxicology, functional genomics and nutrigenomics.
SummaryModern chromatography largely uses the technique of gas chromatography coupled with mass spectrometry (GC–MS). For a set of data concerning the drought resistance of barley, the problem of the characterization of a covariance structure is investigated with the use of two methods. The first is based on the Frobenius norm and the second on the entropy loss function. For the four considered covariance structures – compound symmetry, three-diagonal and penta-diagonal Toeplitz and autoregression of order one – the Frobenius norm indicates the compound symmetry matrix and autoregression of order one as the most relevant, whilst the entropy loss function gives a slight indication in favor of the compound symmetry structure.
Summary
Linearly structured covariance matrices are widely used in multivariate analysis. The covariance structure can be chosen from a class of linear structures. Therefore, the optimal structure is identified in terms of minimizing the discrepancy function. In this research, the entropy loss function is used as the discrepancy function. We give a methodology and algorithm for determining the optimal structure from the class of structures under consideration. The accuracy of the proposed method is checked using a simulation study.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.