Background Malaria is the leading vector borne parasitic disease causing enormously high morbidity and mortality worldwide. There have been huge efforts so far to control and eliminate malaria in the world. However, high prevalence of asymptomatic carriage poses a threat on malaria control and elimination programs. Since asymptomatic infections present no overt sign and symptoms, they do not get clinical attention. Moreover, asymptomatic cases are a potential source of infection in high and low transmission settings. Despite the presence of some pocket data, the prevalence of asymptomatic carriage has not yet been known nationally and the current study area as well. Therefore, we aimed to assess the prevalence of asymptomatic malaria cases and associated factors in households and neighbors of laboratory confirmed cases in Raya Kobo district, Northeast Ethiopia. Methods: A community based cross-sectional study was conducted from February to April, 2019 among 270 study participants selected by convenient sampling technique at the community where laboratory confirmed cases were found. A structured questionnaire was used to collect data on socio-demographic characteristics, individual and household level factors. The data were entered in Epi Data 3.1 version and analyzed by using SPSS version 20. Variables with P<0.25 in the bivariable analysis were taken to the multivariable analysis to control potential confounders, and p< 0.05 was considered statistically significant. Results: The overall prevalence of asymptomatic malaria was 7.0%, with 3.0%, 5.2% and 12.0%, respectively by Rapid diagnostic tests (RDT), Microscopy and Polymerase chain reaction (PCR). Majority of the infections (73.7%) were identified from index households. PCR detected asymptomatic infections about 2.7 and 2.3 folds higher than RDT and microscope, respectively. Previous malaria history (AOR: 4.030, 95% CI: 1.021-15.903), living with index cases (AOR: 3.880, 95% CI: 1.275-11.806) and family size > 6 members (AOR: 4.820, 95% CI: 1.260-18.437) were significant predictors of Plasmodium spp infection.Conclusion: Reactive case detection had identified considerably higher asymptomatic malaria cases at the community. Therefore, active case investigation should be established in the community by tracking the symptomatic cases at the health facilities. Diagnostic tests involving the PCR should be implemented in the surveillance of asymptomatic malaria. Active malaria cases should also be treated.