Chemical hydrograph separation using electrical conductivity and digital filters is applied to quantify runoff components in the 1,640 km2 semi‐arid Kaap River catchment and its subcatchments in South Africa. A rich data set of weekly to monthly water quality data ranging from 1978 to 2012 (450 to 940 samples per site) was analysed at 4 sampling locations in the catchment. The data were routinely collected by South Africa's national Department of Water and Sanitation, using standard sampling procedures. Chemical hydrograph separation using electrical conductivity (EC) as a tracer was used as reference and a recursive digital filter was then calibrated for the catchment. Results of the two‐component hydrograph separation indicate the dominance of baseflow in the low flow regime, with a contribution of about 90% of total flow; however, during the wet season, baseflow accounts for 50% of total flow. The digital filter parameters were very sensitive and required calibration, using chemical hydrograph separation as a reference. Calibrated baseflow estimates ranged from 40% of total flow at the catchment outlet to 70% in the tributaries. The study demonstrates that routinely monitored water quality data, especially EC, can be used as a meaningful tracer, which could also aid in the calibration of a digital filter method and reduce uncertainty of estimated flow components. This information enhances our understanding of how baseflow is generated and contributed to streamflow throughout the year, which can aid in quantification of environmental flows, as well as to better parameterize hydrological models used for water resources planning and management. Baseflow estimates can also be useful for groundwater and water quality management.

Abstract. The Incomati is a semi-arid trans-boundary river basin in southern Africa, with a high variability of streamflow and competing water demands from irrigated agriculture, energy, forestry and industries. These sectors compete with environmental flows and basic human water needs, resulting in a "stressed" water resource system. The impacts of these demands, relative to the natural flow regime, appear significant. However, despite being a relatively well-gauged basin in South Africa, the natural flow regime and its spatial and temporal variability are poorly understood and remain poorly described, resulting in a limited knowledge base for water resource planning and management decisions. Thus, there is an opportunity to improve water management, if it can be underpinned by a better scientific understanding of the drivers of streamflow availability and variability in the catchment.In this study, long-term rainfall and streamflow records were analysed. Statistical analysis, using annual anomalies, was conducted on 20 rainfall stations, for the period 1950-2011. The Spearman test was used to identify trends in the records on annual and monthly timescales. The variability of rainfall across the basin was confirmed to be high, both intraand inter-annually. The statistical analysis of rainfall data revealed no significant trend of increase or decrease. Observed flow data from 33 gauges were screened and analysed, using the Indicators of Hydrologic Alteration (IHA) approach. Temporal variability was high, with the coefficient of variation of annual flows in the range of 1 to 3.6. Significant declining trends in October flows, and low flow indicators, were also identified at most gauging stations of the Komati and Crocodile sub-catchments; however, no trends were evident in the other parameters, including high flows. The trends were mapped using GIS and were compared with historical and current land use. These results suggest that land use and flow regulation are larger drivers of temporal changes in streamflow than climatic forces. Indeed, over the past 40 years, the areas under commercial forestry and irrigated agriculture have increased over 4 times.

Abstract. The understanding of runoff generation mechanisms is crucial for the sustainable management of river basins such as the allocation of water resources or the prediction of floods and droughts. However, identifying the mechanisms of runoff generation has been a challenging task, even more so in arid and semi-arid areas where high rainfall and streamflow variability, high evaporation rates, and deep groundwater reservoirs may increase the complexity of hydrological process dynamics. Isotope and hydrochemical tracers have proven to be useful in identifying runoff components and their characteristics. Moreover, although widely used in humid temperate regions, isotope hydrograph separations have not been studied in detail in arid and semiarid areas. Thus the purpose of this study is to determine whether isotope hydrograph separations are suitable for the quantification and characterization of runoff components in a semi-arid catchment considering the hydrological complexities of these regions. Through a hydrochemical characterization of the surface water and groundwater sources of the catchment and two-and three-component hydrograph separations, runoff components of the Kaap catchment in South Africa were quantified using both isotope and hydrochemical tracers. No major disadvantages while using isotope tracers over hydrochemical tracers were found. Hydrograph separation results showed that runoff in the Kaap catchment is mainly generated by groundwater sources. Two-component hydrograph separations revealed groundwater contributions of between 64 and 98 % of total runoff. By means of threecomponent hydrograph separations, runoff components were further separated into direct runoff, shallow and deep groundwater components. Direct runoff, defined as the direct precipitation on the stream channel and overland flow, contributed up to 41 % of total runoff during wet catchment conditions. Shallow groundwater defined as the soil water and nearsurface water component (and potentially surface runoff) contributed up to 45 % of total runoff, and deep groundwater contributed up to 84 % of total runoff. A strong correlation for the four studied events was found between the antecedent precipitation conditions and direct runoff. These findings suggest that direct runoff is enhanced by wetter conditions in the catchment that trigger saturation excess overland flow as observed in the hydrograph separations.