Increases in deep drainage below the root-zone can lead to secondary salinity. Few data were available for drainage under dryland cropping and pastures in the Queensland Murray–Darling Basin (QMDB) before this study. Modelled estimates were available; however, without measured drainage these could not be validated. Soil chloride (Cl) mass-balance was used to provide an extensive survey of deep drainage. The method is ‘backward-looking’ and can detect low rates of drainage over longer times. Soil Cl and other soil properties were collated for a number of soils, mostly Vertosols and Sodosols, for paired native vegetation, cropped and sometimes pasture sites, from historical data and new soil sampling. Large amounts of salt and Cl had accumulated under native vegetation (Cl mean 25 t/ha, range 6–54, in 2.4 m depth), due to low rates of drainage. Steady-state Cl balances for native vegetation gave average drainage of 1.2 mm/year at wetter, eastern sites and 0.3 mm/year for Sodosols and Grey Vertosols in drier, western areas. Chloride profiles were mostly of a shape indicating matrix/piston flow. One site (Hermitage fallow trial) appeared to be affected by diffusion of Cl to a watertable. The Cl profiles from 14 longer term cropping sites (18–70 years), mainly used for winter cropping/summer fallow, indicate: (i) large losses of Cl since clearing (mean 50%, range 13-85% for 0–1.5 m soil); and (ii) drainage rates from transient Cl balance are a relatively low percentage of rainfall but are considerably higher than under native vegetation. Drainage averaged 8 mm/year and ranged from 2 to 18 mm/year. This variation is partly explained by rainfall (R2 = 0.63) (500–730 mm/year) and soil plant-available water capacity (R2 = 0.77) (80–300 mm). Deep drainage increases with increasing rainfall and with decreasing available water capacity. Drainage under pasture was less than under cropping but greater than under native vegetation. The deep drainage water (leachate) was of poor quality and will increase salinity if added to good quality groundwater. Leachate at nine sites was too saline to be used (undiluted) for irrigation (>2500 mg Cl/L) and was marginal at the remainder of sites (~800 mg Cl/L). Cropping areas in the QMDB have the precursors for secondary salinity development—high salt loads and an increase in drainage after clearing. The Vertosols and Sodosols studied occur in 90% of croplands in the QMDB. Salinisation will depend on the properties of the underlying regolith and groundwater systems.

Productivity of grain crops grown under dryland conditions in north-eastern Australia depends on efficient use of rainfall and available soil moisture accumulated in the period preceding sowing. However, adverse subsoil conditions including high salinity, sodicity, nutrient imbalances, acidity, alkalinity, and high concentrations of chloride (Cl) and sodium (Na) in many soils of the region restrict ability of crop roots to access this stored water and nutrients. Planning for sustainable cropping systems requires identification of the most limiting constraint and understanding its interaction with other biophysical factors. We found that the primary effect of complex and variable combinations of subsoil constraints was to increase the crop lower limit (CLL), thereby reducing plant available water. Among chemical subsoil constraints, subsoil Cl concentration was a more effective indicator of reduced water extraction and reduced grain yields than either salinity or sodicity (ESP). Yield penalty due to high subsoil Cl was seasonally variable, with more in-crop rainfall (ICR) resulting in less negative impact. A conceptual model to determine realistic yield potential in the presence of subsoil Cl was developed from a significant positive linear relationship between CLL and subsoil Cl: Since grid sampling of soil to identify distribution of subsoil Cl, both spatially across landscape and within soil profile, is time-consuming and expensive, we found that electromagnetic induction, coupled with yield mapping and remote sensing of vegetation offers potential to rapidly identify possible subsoil Cl at paddock or farm scale. Plant species and cultivars were evaluated for their adaptations to subsoil Cl. Among winter crops, barley and triticale, followed by bread wheat, were more tolerant of high subsoil Cl concentrations than durum wheat. Chickpea and field pea showed a large decrease in yield with increasing subsoil Cl concentrations and were most sensitive of the crops tested. Cultivars of different winter crops showed minor differences in sensitivity to increasing subsoil Cl concentrations. Water extraction potential of oilseed crops was less affected than cereals with increasing levels of subsoil Cl concentrations. Among summer crops, water extraction potential of millet, mungbean, and sesame appears to be more sensitive to subsoil Cl than that of sorghum and maize; however, the differences were significant only to 0.7 m. Among pasture legumes, lucerne was more tolerant to high subsoil Cl concentrations than the others studied. Surface applied gypsum significantly improved wheat grain yield on soils with ESP >6 in surface soil (0–0.10 m). Subsurface applied gypsum at 0.20–0.30 m depth did not affect grain yield in the first year of application; however, there was a significant increase in grain yield in following years. Better subsoil P and Zn partially alleviated negative impact of high subsoil Cl. Potential savings from improved N fertilisation decisions for paddocks with high subsoil Cl are estimated at ~$AU10 million per annum.

Clearing native vegetation and introducing crops and pastures may increase deep drainage and result in dryland salinity. In south-west Queensland, native vegetation of the Goondoola Basin has been substantially cleared for cropping and pastoral activities, resulting in shallow groundwater and localised salinity. Simulation modelling was used to estimate the water balance of a range of vegetation and soil types. Six soils were studied, with plant-available water capacity (PAWC) of 71 mm (a Kandosol) to 198 mm (a Vertosol) for 1200 mm depth. Vegetation types were annual wheat, opportunity cropping, and perennial pastures in poor and good condition, and high quality perennial pasture with deep roots growing on deep (2400 mm) variants of the 6 soil types. Opportunity cropping did not reduce deep drainage. Substantial differences were found in long-term average deep drainage (mm/year) between wheat crops and pastures for all soil types. The differences in deep drainage between wheat cropping and pasture in good condition were greatest for the 2 Kandosols, which had the lowest PAWC (34 and 21 mm/year less deep drainage, reductions of 53% and 62%, respectively), and a Vertosol with intermediate PAWC (23 mm/year less deep drainage). A Chromosol and a Dermosol with intermediate PAWC had smaller reductions in deep drainage (14 and 11 mm/year, respectively). In the case of a Vertosol with high PAWC (198 mm), deep drainage was negligible with all pastures. Due to increased infiltration and reduced soil evaporation, more deep drainage was simulated with pasture in good condition than pastures in poor condition, especially for 2 Kandosols. Pasture with deep roots (2400 mm) growing on deep variants (2400 mm) of the 6 soils had lower rates of deep drainage than the other pastures. Simulated deep drainage and other components of the water balance were in good agreement with field measurements and expectations. These results indicate that large reductions in deep drainage can be achieved in the Goondoola Basin by replacing cropping with pastoral activities. Kandosol soils used for wheat cropping should be the primary target for land use change.

Changes in land use can affect the soil water balance and mobilise primary salinity. This paper examines changes in soil chloride (Cl) and deep drainage under pasture and annual cropping on five gilgaied Grey Vertosols in southern inland Queensland, Australia, comparing them to remnant native vegetation. Transient soil Cl mass-balance (CMB) was used for crop and pasture sites, as it is suitable for determining the long-term, low rates of drainage since clearing some 40–50 years ago. Steady-state CMB was used for native vegetation. Large masses of salts and Cl were stored under native vegetation (31–103 t/ha of Cl to 3.2 m), and deep drainage was low (0.10–0.27 mm/year). The Cl profiles were generally of a normal shape for matrix flow (e.g. no bypass flow). Soil Cl was lost under cropping (average 65% lost to 1.4 m) and pasture (32%) compared with native vegetation. This lost Cl was not stored within the top 4–5 m of soil, indicating movement of water below 4–5 m. Deep drainage averaged 10 mm/year under cropping for both gilgai mounds and depressions (range 2.7–25 mm/year), and 3.3 and 5.1 mm/year under pasture for mounds and depressions, respectively. Subsoil (depth 1.5–4+ m) was generally dry under native vegetation and wetter under cropping and pasture. Deep drainage over the last 40–50 years was stored in the unsaturated zone (to deeper than 4+ m), indicating a long time lag between land-use change and groundwater response. Steady-state CMB greatly underestimated drainage for crop and pasture sites.

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