Five endophytic bacterial isolates were studied to identify morphologically and biochemically, according to established protocols and further confirmed by 16S rDNA Sanger sequencing, as Priestia megaterium, Staphylococcus caprae, Neobacillus drentensis, Micrococcus yunnanensis, and Sphingomonas paucimobiliz, which were then tested for phytohormone, ammonia, and hydrolytic enzyme production. Antioxidant compounds total phenolic content (TPC), and total flavonoid content (TFC) were assessed by using bacterial crude extracts obtained from 24-hour shake-flask culture. Phylogenetic tree analysis of those identified isolates shared sequence similarities with the members of Bacillus, Micrococcus, Staphylococcus, and Pseudomonas species, and after GenBank submission, accession numbers for the nucleotide sequences were found to be MW494406, MW494408, MW494401, MW494402, and MZ021340, respectively. In silico analysis was performed to identify their bioactive genes and compounds in the context of bioactive secondary metabolite production with medicinal value, where nine significant bioactive compounds according to six different types of bioactive secondary metabolites were identified, and their structures, gene associations, and protein-protein networks were analyzed by different computational tools and servers, which were reported earlier with their antimicrobial, anti-infective, antioxidant, and anti-cancer capabilities. These compounds were then docked to the 3-chymotrypsin-like protease (3CLpro) of the novel SARS-COV-2. Docking scores were then compared with 3CLpro reference inhibitor (lopinavir), and docked compounds were further subjected to ADMET and drug-likeness analyses. Ligand-protein interactions showed that two compounds (microansamycin and aureusimine) interacted favorably with coronavirus 3CLpro. Besides, in silico analysis, we also performed NMR for metabolite detection whereas three metabolites (microansamycin, aureusimine, and stenothricin) were confirmed from the 1H NMR profiles. As a consequence, the metabolites found from NMR data aligned with our in-silico analysis that carries a significant outcome of this research. Finally, Endophytic bacteria collected from medicinal plants can provide new leading bioactive compounds against target proteins of SARS-COV-2, which could be an effective approach to accelerate drug innovation and development.

Soil samples were collected from M. R. Khan tea-estate area of Moulvibazar district, Bangladesh. Organic matter, active acidity, reserve acidity, cation exchange capacity, clay content and textural class of the collected soil samples for different topographic positions and depths were determined. The percentage of sand, silt and clay varied from 59.75 to 70.50, 12.50 to 20.00 and 14.50 to 22.75, respectively. Active acidity and reserve acidity of the soils varied from 4.13 to 5.82 and 3.46 to 4.84, respectively. Organic matter content varied from 0.37% to 1.93%. Cation exchange capacity (CEC) varied from 11.42 to 24.86 cmolKg -1 . Soils were acidic in nature with considerably high reserve acidity. The measured parameters of the soil samples were plotted and analyzed with reference to topography and depth. The parameters have been found to vary with sampling sites, depths and topography.

The most widely used and accessible monosaccharides have a number of stereogenic centers that have been hydroxylated and are challenging to chemically separate. As a result, the task of regioselective derivatization of such structures is particularly difficult. Considering this fact and to get novel rhamnopyranoside-based esters, DMAP-catalyzed di-O-stearoylation of methyl α-l-rhamnopyranoside (3) produced a mixture of 2,3-di-O- (4) and 3,4-di-O-stearates (5) (ratio 2:3) indicating the reactivity of the hydroxylated stereogenic centers of rhamnopyranoside as 3-OH > 4-OH > 2-OH. To get novel biologically active rhamnose esters, di-O-stearates 4 and 5 were converted into six 4-O- and 2-O-esters 6–11, which were fully characterized by FT-IR, 1H, and 13C NMR spectral techniques. In vitro antimicrobial assays revealed that fully esterified rhamnopyranosides 6–11 with maximum lipophilic character showed better antifungal susceptibility than antibacterial activity. These experimental findings are similar to the results found from PASS analysis data. Furthermore, the pentanoyl derivative of 2,3-di-O-stearate (compound 6) showed better antifungal functionality against F. equiseti and A. flavus, which were found to be better than standard antibiotics. To validate the better antifungal results, molecular docking of the rhamnose esters 4–11 was performed with lanosterol 14α-demethylase (PDB ID: 3LD6), including the standard antifungal antibiotics ketoconazole and fluconazole. In this instance, the binding affinities of 10 (−7.6 kcal/mol), 9 (−7.5 kcal/mol), and 7 (−6.9 kcal/mol) were better and comparable to fluconazole (−7.3 kcal/mol), indicating the likelihood of their use as non-azole type antifungal drugs in the future.

Bangladesh is one of the tea producing countries of the world. It has 163 tea estates. Rangapani is a low yielding tea estate relative to other neighboring tea estates of Chittagong district in Bangladesh. A total 54 soil samples were collected from six different hills and three topographic positions having different depths of Rnagapanni Tea-Estate. Physico-Chemical properties of soils such as active acidity, reserve acidity, cation exchange capacity and clay content of the collected soil samples were determined. The measured parameters of the soil samples were plotted and analyzed with reference to site and topography. The parameters have been found to vary with sampling sites, depths and topography. Active acidity and reserve acidity were very low, with some exceptions compared to the optimum range for tea cultivation. Sand, silt, clay and cation exchange capacity (CEC) were found in reasonable range Keywords:  Soil; Active acidity; Reserve acidity; Cation exchange capacity; Clay content. © 2011 JSR Publications. ISSN: 2070-0237 (Print); 2070-0245 (Online). All rights reserved. doi: 10.3329/jsr.v3i3.7503               J. Sci. Res. 3 (3), 683-688 (2011)