2011
DOI: 10.1080/02664760903406447
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α-stable laws for noncoding regions in DNA sequences

Abstract: In this work, we analyze the long-range dependence parameter for a nucleotide sequence in several different transformations. The long-range dependence parameter is estimated by the approximated maximum likelihood method, by a novel estimator based on the spectral envelope theory, by a regression method based on the periodogram function, and also by the detrended fluctuation analysis method. We study the length distribution of coding and noncoding regions for all Homo sapiens chromosomes available from the Euro… Show more

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Cited by 7 publications
(2 citation statements)
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“…Another procedure to detect long‐range dependence is the detrended fluctuation analysis (DFA) proposed by Peng et al [1992]. Crato et al [2010] give a full description and technical details of the DFA method, while Crato et al [2011] report an application to DNA sequences and Livina et al [2003] apply the DFA to measure the correlation properties of river flow fluctuations. To apply the DFA method to the original and deseasonalized Ladário time series we considered two different values of g ( n ) [for details, see Crato et al , 2010], where n = 1092 is the sample size.…”
Section: Preliminary Analysis Of the Ladário Time Seriesmentioning
confidence: 99%
“…Another procedure to detect long‐range dependence is the detrended fluctuation analysis (DFA) proposed by Peng et al [1992]. Crato et al [2010] give a full description and technical details of the DFA method, while Crato et al [2011] report an application to DNA sequences and Livina et al [2003] apply the DFA to measure the correlation properties of river flow fluctuations. To apply the DFA method to the original and deseasonalized Ladário time series we considered two different values of g ( n ) [for details, see Crato et al , 2010], where n = 1092 is the sample size.…”
Section: Preliminary Analysis Of the Ladário Time Seriesmentioning
confidence: 99%
“…The aÀstable distribution is considered as the generalization of the Gaussian one. Although the first application of this distribution appeared in the work of Mandelbrot [16], where the financial time series were analyzed, the aÀstable distributions and processes have found various applications, including economy [17][18][19][20][21][22][23], physics [24][25][26][27], signal processing [28][29][30][31], computer science [32][33][34][35], geology and geophysics [36][37][38], biology [39][40][41][42], and many other fields. The aÀstable distributions are also considered for climate data modelling, see, e.g., [43][44][45][46].…”
Section: Introductionmentioning
confidence: 99%