“…siRNA for downregulating gene expression was done by transfection of RNA oligonucleotides with lipofectamine 2000 (Invitrogen, 11668) according to the manufacturer's instructions. The negative control (NC) siRNA and siRNAs against SQSTM1, AURKA, MAP1LC3, ATG5 and BECN1 were synthesized by Shanghai GenePharma Co. For SQSTM1, two siRNA oligonucleotides were used, SQSTM1-B: 5'-GGA CCC ATC TGT CTT CAA A-3', SQSTM1-C: 5'-GCA TTG AAG TTG ATA TCG A-3'; 41 For AURKA, two siRNA oligonucleotides were used, AURKA-1: 5'-AUG CCC UGU CUU ACU GUC A-3', 8 AURKA-2: 5'-AAC GTG TTC TCG TGA CTC AGC-3'; 51 For AURKB, 5'-AAC GCG GCA CUU CAC AAU UGA-3'; 52 For MAP1LC3, a pool of three siRNA oligonucleotides was used, Quantification of EGFP-LC3 puncta assay. Cells were transfected with EGFP-LC3 constructs (Addgene, 11546) 56 in Opti-MEM (Invitrogen, 11058) using Lipofectamine 2000 (Invitrogen, 11668).…”