The detailed structure of catalytic center of water oxidation, Mn 4 Ca-cluster, in photosystem II (PSII) has been reported recently. However, due to the radiation damage induced by X-ray and the complexity of the Mn 4 Ca-cluster, the assignment of the 4 -O5 atom coordinated by three Mn and one Ca 2+ ions is still lack of essential evidences. In this article, we synthesized one Mn complex containing two 4 -O atoms. It is found that the lengths of all 4 -O-Mn bonds in this Mn complex are in the range of 1.89-2.10 Å, which are significantly shorter than 2.40-2.61 Å distance of 4 -O5-Mn bonds in Mn 4 Ca-cluster observed in the crystal structure of PSII. In addition, DFT calculations have been carried out on the Mn 4 Ca-cluster. It is found that the O atom of 4 -O or 4 -OH always trends to deviate from the center position of four metal ions, resulting in unequal bond lengths of four 4 -O-M (M=Mn or Ca), which is obviously different with larger and nearly equal distances between 4 -O and four metal ions observed in the crystal structure. Based on these results, we suggest that the 4 -atom in Mn 4 Ca-cluster of PSII is unlikely to be a Recently, Umena et al. [7] have reported the crystal structure of PSII at a resolution of 1.9 Å, which revealed the detailed structure of the Mn 4 Ca-cluster. The core of the Mn 4 Ca-cluster is shown in Figure 1, wherein four Mn and one Ca ions are connected by five -O atoms. The distances between 3 -O/ 2 -O and Mn ions are all in the range of 1.8-2.1 Å; while the lengths of three 4 -O5-Mn bonds are in the range of 2.4-2.61 Å. The latter is significant longer than those of 2 -O-Mn or 3 -O-Mn bonds. The apparently larger and nearly equal lengths of three 4 -O-Mn bonds indicate that the 4 -O5 atom is very special. In fact, this 4 -O5 atom has attracted extensive attentions by theoretical studies recently, and several groups [8][9][10] suggested that the 4 -O5 atom may play crucial roles to provide one oxygen source for the O-O bond formation. However, due to radiation damage induced by X-ray [11,12] and the complexity of the Mn 4 Ca-cluster, especially the assignment of this 4 -O5 atom was suffered by its weak electron density compared with all other O atoms in Mn 4 Ca-cluster in X-ray diffraction data [7]. Therefore, the assignment of 4 -O5 is still an open question. Here, we have carried out DFT calculations on Mn 4 Ca-cluster to check the rationality of the assignment of 4 -O5 atom. In addition, we have also synthesized a manganese complex containing 4 -O atom. The structural analysis on this compound further provides a clue to demonstrate the possible structure characters of the 4 -O in