Abstract. Leptosphaeria biglobosa 'canadensis' is reported for the first time in Australia. All 88 Leptosphaeria isolates cultured from Brassica juncea stubble from northern NSW were L. biglobosa 'canadensis' whilst all 55 isolates cultured from Victorian stubble of the same B. juncea lines were L. maculans. Both L. biglobosa 'canadensis' and L. maculans formed similar sized lesions on B. juncea cotyledons after 14 days. However, L. biglobosa 'canadensis' isolates colonised stems less effectively than L. maculans and consequently caused less crown cankering.The two Dothideomycetes, Leptosphaeria maculans and L. biglobosa, comprise a species complex associated with disease of crucifers including Brassica napus (canola, oilseed rape). Through the use of molecular techniques, L. biglobosa has been divided into six subclades, namely 'canadensis', 'occiaustralensis', 'brassicae', 'australiensis', 'erysimii' and 'thlaspii'. Leptosphaeria maculans has been divided into two subclades, 'brassicae' and 'lepidii ' (Mendes-Pereira et al. 2003;Voigt et al. 2005;Vincenot et al. 2008). In this paper we refer to L. maculans 'brassicae' as L. maculans.During infection of B. napus, L. maculans produces grey/ green large leaf lesions, followed by crown stem cankers. This disease, known as blackleg or Phoma stem canker, results in significant yield losses, particularly in Australia (Howlett 2004;Fitt et al. 2006a). In contrast, none of the subclades of L. biglobosa are reported to cause crown stem cankers. Leptosphaeria biglobosa 'brassicae' is the most common subclade. It is found in most canola growing areas with the exception of central Canada and Australia (Fitt et al. 2006a). These isolates cause small dark leaf lesions followed by pale brown stem lesions with a dark margin on the upper stem (known as Phoma or upper stem lesions) (West et al. 2002). In Australia, L. biglobosa 'australiensis' (cultured from B. napus) and more recently, L. biglobosa 'occiaustralensis' (cultured from B. napus and Raphanus raphanistrum (wild radish)) have been described in eastern and western Australia, respectively (Plummer et al. 1994;Vincenot et al. 2008).Blackleg is primarily controlled by breeding varieties with resistance to L. maculans (Delourme et al. 2006). Brassica juncea (Indian mustard) is generally more resistant to L. maculans than B. napus (Purwantara et al. 1998;Li et al. 2008). Additionally, B. juncea is more drought-tolerant and can be grown in regions with short, warm to hot growing seasons in which soil water supply is unreliable (Oram et al. 2005). In Canada, B. juncea has been grown as a condiment mustard crop for 20 years, specifically in the hotter, drier areas of western Canada. In 2002, B. juncea varieties were released that produced canola quality oils (Burton et al. 2004). Over the past 20 years in Australia, small acreages in regions including northern New South Wales have produced condiment mustard. Brassica juncea varieties that produce canola-quality oils were commercially released in 2007 .Since blackleg disease is...