Whole-Genome Sequence of Oryctes rhinoceros Nudivirus from Riau Province, Indonesia

Abstract

A double-stranded DNA virus, Oryctes rhinoceros nudivirus (OrNV), was detected in the total DNA of diseased larvae of O. rhinoceros in Riau Province, Indonesia. The complete genome sequence was 124,926 bp long and encodes 123 open reading frames (ORFs). This strain belongs to the family Nudiviridae and was designated LiboV.

Genomic resources for population analyses of an invasive insect pest Oryctes rhinoceros

“…Over the last few years, next-generation sequencing (NGS) experiments have been done for different CBR collections, accumulating data from the reduced-representation sequencing (Restriction site-Associated DNA sequencing, RAD-Seq; Genotyping-by-Sequencing, GBS) 7,9 , as well as RNA sequencing (RNA-Seq) [10][11][12][13] and Whole Genome Sequencing (WGS) [14][15][16] . Until recently, however, absence of a reference genome assembly for CRB's nuclear and mitochondrial genomes have prevented the direct comparison and collation of different datasets.…”