Vollautomatische Vorverarbeitung und rigide Registrierung zur Rekonstruktion von Bildern histologischer Stufenschnitte der Rattenleber

Weinhold, Anna; Wirtz, Stefan; Schenk, Andrea; Böhler, Tobias; Jiang, Xiaoyi; Dahmen, Uta; Dirsch, Olaf; Peitgen, Heinz‐Otto

doi:10.1007/978-3-540-71091-2_84

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Assessment Of the Extent Of Stump Necrosis Using 3d Histomor1

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Cited by 2 publications

(2 citation statements)

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“…Single pictures were stitched into one picture using proprietary software (MedXP GmbH). Image processing and volumetry for 3D reconstruction was done using MeVisLab software applying a newly developed program module [8].…”

Section: Assessment Of the Extent Of Stump Necrosis Using 3d Histomormentioning

confidence: 99%

Small-for-Size Syndrome in the Rat: Does Size or Technique Matter?

Dahmen

Madrahimov

Madrahimova

et al. 2008

Journal of Surgical Research

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Section: Assessment Of the Extent Of Stump Necrosis Using 3d Histomormentioning

confidence: 99%

Small-for-Size Syndrome in the Rat: Does Size or Technique Matter?

Dahmen

Madrahimov

Madrahimova

et al. 2008

Journal of Surgical Research

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“…Their goal is to be able to remodel the neural distribution in the brain [1]. Furthermore, Weinhold et al [2] reconstruct a series of histological slices of a rat liver, to be able to understand the capability of the liver to regenerate.…”

Section: Introductionmentioning

confidence: 99%

Interpolation of Histological Slices by Means of Non-rigid Registration

Gaffling

Jager

Daum³

et al. 2009

Bildverarbeitung Für Die Medizin 2009

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Abstract. It is a common approach to create and inspect histological slices to investigate functional and morphological structures on a cellular level. For the easier analysis of the resulting data sets, the underlying 3-D structure has to be reconstructed and visualized. Due to mechanical stress imposed on the tissue during the slicing, some slices are damaged, leading to an unsatisfying reconstruction result. In this article we present a means to interpolate missing images. For this, a deformation field, calculated by a variational non-rigid registration method using adjacent slices as reference and template images, is partially applied to the template image. The approach is tested on a histological data set, and evaluated using visual inspection by experts. The resulting reconstruction is shown to be a significant improvement.

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Vollautomatische Vorverarbeitung und rigide Registrierung zur Rekonstruktion von Bildern histologischer Stufenschnitte der Rattenleber

Cited by 2 publications

References 7 publications

Small-for-Size Syndrome in the Rat: Does Size or Technique Matter?

Small-for-Size Syndrome in the Rat: Does Size or Technique Matter?

Interpolation of Histological Slices by Means of Non-rigid Registration

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