“…Release site clearance is likely a complex process and may be influenced by multiple factors (Haucke et al., 2011, Neher, 2010). Previous measurements of diffusion coefficients of membrane proteins have ranged from 1–300 nm 2 /ms (Bannai et al., 2009, Dahan et al., 2003, Funahashi et al., 2018, Gomez-Varela et al., 2010, Groc et al., 2008, Mercer et al., 2011, Mikasova et al., 2008), placing our values of ∼42 nm 2 /ms during the burst phase and ∼10 nm 2 /ms during the sustained phase at the low end of membrane protein measurements and much lower than the previous report on synaptophysin in hippocampal synapses (180 nm 2 /ms) (Funahashi et al., 2018). We propose the following three hypotheses for why our results may differ: (1) the ribbon synapse may be more densely packed with protein and other diffusion barriers than a conventional synapse or perisynaptic regions; (2) our cells exhibit minimally expressing synaptophysin-pHluorin molecules, whereas previous measurements were maximized for visualizing release and hence exhibited a much higher concentration of released synaptophysin; if fixed synaptophysin-binding proteins reside within the active zone, binding sites may be saturated in their model allowing for free diffusion; and (3) synaptophysin may have different mobility in the membrane of fish bipolar cells than in mouse hippocampal neurons.…”