1The SARS-CoV-2 pandemic demonstrates the need for accurate and convenient approaches to 2 diagnose and therapeutically monitor respiratory viral infections. We demonstrated that self-3 sampling with foam swabs is well-tolerated and provides quantitative viral output concordant 4 with flocked swabs. Using longitudinal home-based self-sampling, we demonstrate nasal 5 cytokine levels correlate and cluster according to immune cell of origin. Periods of stable viral 6 loads are followed by rapid elimination, which could be coupled with cytokine expansion and 7 contraction using mathematical models. Nasal foam swab self-sampling at home provides a 8 precise, mechanistic readout of respiratory virus shedding and local immune responses. 9Here we report data on a novel respiratory virus detection method using self-collected nasal 62 foam swabs. This methodology expands our testing armamentarium with easily collected and 63 comfortable swabs that can be applied to viral load and cytokine kinetic studies. Most 64 importantly, they can be easily scaled and used at home in this time of severe testing shortages 65 and dangerous transmission risk. 66 67