Activation loop tyrosine autophosphorylation is an essential requirement for full kinase activation of receptor tyrosine kinases (RTKs). However, mechanisms involved are not fully understood. In general, kinase domains of RTKs are folded into two main lobes, NH 2 -and COOH-terminal lobes. The COOH-terminal lobe of vascular endothelial growth factor receptor-2 (VEGFR-2) is folded into seven ␣-helices (␣D-␣I). In the studies presented here we demonstrate that leucine residues of helix I (␣I) regulate tyrosine autophosphorylation and phosphotransferase activity of VEGFR-2. The presence of leucines 1158, 1161, and 1162 are essential for tyrosine autophosphorylation and kinase activation of VEGFR-2 and are involved in helix-helix packing via hydrophobic interactions. The presence of leucine 1158 is critical for kinase activation of VEGFR-2 and appears to interact with ␣E, ␣F, ␣H, and 7. The analogous residue, leucine 957 on platelet-derived growth factor receptor- and leucine 910 on colony stimulating factor-1R are also found to be critical for tyrosine autophosphorylation of these receptors. Leucines 1161 and 1162 are also involved in helix-helix packing but they play a less critical role in VEGFR-2 activation. Thus, we conclude that leucine motif-mediated helix-helix interactions are critical for kinase regulation of type III RTKs. This mechanism is likely to be shared with other kinases and might provide a basis for the design of a novel class of tyrosine kinase inhibitors.Receptor tyrosine kinases (RTKs) 2 are a large family of enzymes, many of which mediate vital cellular functions of living organisms. The fine-tuning of RTKs function is essential for their normal physiological roles and their aberrant function contributes to human diseases ranging from cancer to diabetes (1-4). RTKs consist of an extracellular region that serves a ligand binding site, a transmembrane domain, and a cytoplasmic region, which possesses intrinsic tyrosine kinase activity. In the inactive state, the activation loop is thought to occupy the active site preventing substrate access and ATP binding (5, 6). Ligand-mediated RTK activation leads to RTK dimerization. Dimerization is believed to facilitate transphosphorylation of one or two tyrosines within the activation loop. Based on the crystal structure of the insulin receptor (7), fibroblast growth factor receptor (8), it is proposed that activation loop tyrosine autophosphorylation removes the activation loop away from the active site and creates appropriate conformation for optimal substrate and ATP binding (6 -8). The catalytic kinase domain of RTKs ranges from 250 to 300 amino acid residues and contains highly conserved amino acid sequences. The typical kinase domain of RTKs is folded into two main lobes, NH 2 -and COOH-terminal lobes. Catalysis occurs in a cleft between the two domains. Residues in the NH 2 -terminal lobe are mainly in -sheets and are involved in ATP binding. Residues in the COOH-terminal lobe, however, are primarily in ␣-helical conformation and are importan...