Distamycin A has been described as an inhibitor of the cellular pathogenesis of vaccinia virus in culture. Distamycin is an antibiotic that specifically targets the minor groove of DNA. We show here that distamycin is a potent inhibitor of vaccinia virus replication. Pulse-labeling experiments showed that most major late proteins failed to accumulate in the presence of the antibiotic. We characterized the effect of distamycin on vaccinia virus nucleic acid biosynthesis with the goal of determining the inhibitor's target. Early gene transcription was unaffected. DNA synthesis proceeded at normal rates, but DNA accumulated in large masses in the cytoplasm with no evidence of virion assembly. Transcription from the intermediate class promoter for the I1L gene was partially reduced by distamycin; however, transcription from the intermediate promoters for the three late transcription factor genes was severely inhibited. The accumulation of the late transcripts for the viral F17R and A10L genes also was severely impaired and was shown to be a direct inhibition of late promoter activity. These results indicate that inhibition of postreplicative intermediate and late transcription is the basis for inhibition of vaccinia virus by distamycin and indicate that DNA minor-groove ligands hold promise for effective anti-poxvirus drugs.Distamycin A is an antibiotic that reduces the pathogenic effects of vaccinia virus. Distamycin blocks virus-induced cell syncytium formation (22) and inhibits the visually observed cytopathic effects of the virus in cultured cells (16). Distamycin targets the minor groove of DNA (10), preferentially binding DNA sequences that are five consecutive A-T pairs, with affinity that varies with the particular sequence (1). The base composition of the DNA genome of vaccinia virus is 66% A-T, with transcriptional promoter regions being close to 90% A-T, making them ideal targets for the antibiotic.Vaccinia virus replicates its genome and assembles progeny virions exclusively in the cytoplasm of the infected cell. The processes of DNA synthesis and transcription of the three different classes of genes are coordinated in a sequential manner (reviewed in reference 4). Upon entry of the cell, viral early gene transcription begins immediately. The early gene products include factors participating in DNA synthesis that begins about an hour after infection. As DNA synthesis initiates, early gene transcription ceases and intermediate gene transcription ensues. Shortly thereafter, late gene transcription begins and intermediate gene transcription wanes. The virus-encoded proteins required for the transcription of each gene class are products of the preceding class in a gene expression cascade. The promoters for vaccinia virus early, intermediate, and late genes have A-T-rich motifs whose interaction with transcription factors potentially could be affected by a DNA minorgroove ligand. The early promoter element is targeted by the early transcription factor (6). We have shown that distamycin impairs DNA binding by ...