This paper presents a flexible finite‐difference technique for analyzing the nonuniform guiding structures. Because the voltage and current variations along the nonuniform structure differ for each segment, this work considers the adaptable discretization steps. This technique increases the accuracy of the final response. Moreover, by applying the singular value decomposition and discarding the nonprincipal singular values, an optimal lower rank approximation of the discretization matrix is obtained. The computational cost of the introduced method is significantly reduced using the optimal discretization matrix. Also, the proposed method can be extended to the nonuniform waveguides. The technique is verified by analyzing several practical transmission lines and waveguides with nonuniform profiles.