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ABSTRACT:Full-length human (hFMO2.1) and monkey (mFMO2) flavin-containing monooxygenase proteins, which share 97% sequence identity, were produced by baculovirus-mediated expression in insect cells and assayed for S-oxygenation under conditions known to affect FMO activity. Both enzymes demonstrated maximal activity at pH 9.5; but hFMO2.1 retained significantly more activity than mFMO2 did at pH 9.0 and higher. hFMO2.1 also retained significantly more activity than mFMO2 did in the presence of magnesium and all detergents tested. Although hFMO2.1 had more residual activity after heating at 45°C than mFMO2, under some conditions, both had less than 10% of control activity, whereas expressed rabbit FMO2 retained over 50% activity. Screening for NADPH-oxygenation by hFMO2.1, indicated that substituted thioureas with a small cross-sectional area (2.4-4.3 Å) are good substrates, whereas 1,3-diphenylthiourea (11.2 Å) was not oxygenated. We confirmed the presence of hFMO2.1 in lung tissue from a heterozygous individual (hFMO2*1/hFMO2*2A) by Western analysis and confirmed activity by S-oxygenation. These microsomes also demonstrated a heatassociated loss of activity similar to expressed hFMO2.1. The heat sensitivity of hFMO2.1 may partially explain why activity in post mortem human lung samples has previously been unreported. Individuals that have the FMO2*1 allele-encoding full-length hFMO2.1 may exhibit altered drug metabolism in the lung.The mammalian flavin-containing monooxygenases (FMO 3 ; EC 1.14.13.8) are a family (each family having a single member) of xenobiotic-metabolizing enzymes that bind FAD as a prosthetic group and NADPH as a cofactor. Substrates are structurally diverse compounds containing a soft nucleophile; although this is commonly nitrogen or sulfur (Ziegler, 1993;Cashman, 1995;Cashman et al., 2000), other nucleophiles, such as some selenium-containing compounds, are also substrates (Chen and Ziegler, 1994). Metabolism by FMO generally yields metabolic products that are more polar and less toxic or less biologically active than the parent xenobiotic, as is the case for tertiary amines (Ziegler, 1984;Damani, 1988). However, bioactivation, often involving sulfur oxygenation, sometimes results (Ziegler, 1991;Cashman, 1995;Genter et al., 1995).Proteins from four forms of FMO have been confirmed (FMOs 1-3 and 5) by immunodetection in human tissue samples (Haining et al., 1997;Myers et al., 1997;Overby et al., 1997; Whetstine et al., 2000;Yeung et al., 2000). Expression of protein from FMO4 and a recently identified sixth isoform on human chromosome 1 (ENTREZ accession AL021026) has not been demonstrated yet. FMO isoforms can be distinguished on the basis of patterns of tissue and developmental expression as exemplified by human isoforms 1 and 3 (Dolphin et al., 1996). In addition, there are isoform differences in substrate specificity determined, in part, by the size and shape of the nucleophilic xenobiotic and isoform-dependent stereosel...