An in-depth understanding of the effects of metal particle sizes on reactions is crucial for tailoring and designing catalysts. Herein, the Pd/CNT catalysts with different Pd particle sizes were prepared and employed to explore the size effects on the Pdcatalyzed hydrogenation of 2,6-diamino-3,5-dinitropyridine (DADNP). The apparent turnover frequencies for DADNP conversion and target 2,3,5,6-tetraaminopyridine (TAP) formation are found to exhibit strong dependence on the Pd particle sizes, indicating that the hydrogenation of DADNP to TAP is typically structure-sensitive. The size-insensitive activation energies extracted from the kinetics studies for DADNP conversion on ≥2.6 nmsized Pd catalysts with similar electronic properties suggest the presence of only one type of active site mainly dominating the reaction. Further combining model calculations based on the cuboctahedron shape for Pd nanoparticles characterized by electron microscopy, the (111) sites are demonstrated as the dominant active sites for DADNP conversion on the ≥2.6 nm-sized Pd catalysts. However, for the Pd catalyst size <2.6 nm, the reaction is shown to be mainly dominated by the Pd electronic properties.