Umbrella Data Management Plans to integrate FAIR data : lessons from the ISIDORe and BY-COVID consortia for pandemic preparedness

David, Romain; Richard, Audrey S.; Claire, Connellan,; Lauer, Katharina B.; Chiusano, Maria Luisa; Goble, Carole; Houde, Martin; Kemmer, Isabel; Keppler, Antje; Lieutaud, Philippe; Ohmann, Christian; Panagiotopoulou, Maria; Khan, Sara Raza; Rybina, Arina; Soiland‐Reyes, Stian; Wit, Charlotte; Wittner, Rudolf; Buono, Rafael Andrade; Marsh, Sarah Arnaud; Pauline, Audergon,; Bonfils, Dylan; Carazo, José-Marı́a; Charrel, Rémi; Coppens, Frederik; Fecke, Wolfgang; Filippone, Claudia; Alvarez, Eva Garcia; Gul, Sheraz; Hermjakob, Henning; Herzog, Katja; Holub, Petr; Kozera, Łukasz; Lister, Allyson L.; López-Coronado, José; Madon, Bénédicte; Majcen, Kurt; Martin, William; Müller, Wolfgang G.; Papadopoulou, Elli; Prat, Christine; Romano, Paolo; Sansone, Susanna-Assunta; Saunders, Gary W.; Blomberg, Niklas; Ewbank, Jonathan J.

doi:10.5281/zenodo.7517068

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“…In this way, life sciences Research Infrastructures are commonly shaping the current progress of data management recommendations. They achieve this through close contact with the needs of scientists as well as with funders and EU-funded consortia and cluster projects such as EOSC-Life 13 as exemplified by the ongoing efforts of HE-funded projects such as ISIDORe 14 to create umbrella DMPs (David et al 2023 ). These extend into many research domains and encompasses research infrastructures beyond bioimaging which is particularly important to facilitate and manage cross-disciplinary projects.…”

Section: Stepping Stones On the Road To Fairmentioning

confidence: 99%

Building a FAIR image data ecosystem for microscopy communities

Martin

Keppler

Serrano-Solano

et al. 2023

Histochem Cell Biol

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Bioimaging has now entered the era of big data with faster-than-ever development of complex microscopy technologies leading to increasingly complex datasets. This enormous increase in data size and informational complexity within those datasets has brought with it several difficulties in terms of common and harmonized data handling, analysis, and management practices, which are currently hampering the full potential of image data being realized. Here, we outline a wide range of efforts and solutions currently being developed by the microscopy community to address these challenges on the path towards FAIR bioimaging data. We also highlight how different actors in the microscopy ecosystem are working together, creating synergies that develop new approaches, and how research infrastructures, such as Euro-BioImaging, are fostering these interactions to shape the field.

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Section: Stepping Stones On the Road To Fairmentioning

confidence: 99%